Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.15■□□□□ 0.34
Shoc2O88520 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shoc2O88520 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Shoc2O88520 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shoc2O88520 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shoc2O88520 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shoc2O88520 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shoc2O88520 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Shoc2O88520 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.15■□□□□ 0.34
Shoc2O88520 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shoc2O88520 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.15■□□□□ 0.34
Shoc2O88520 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shoc2O88520 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shoc2O88520 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.14■□□□□ 0.33
Shoc2O88520 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.14■□□□□ 0.33
Shoc2O88520 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Shoc2O88520 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.14■□□□□ 0.33
Shoc2O88520 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.14■□□□□ 0.33
Shoc2O88520 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Shoc2O88520 Gm7370-201ENSMUST00000219471 767 ntBASIC17.14■□□□□ 0.33
Shoc2O88520 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Shoc2O88520 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Shoc2O88520 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shoc2O88520 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Shoc2O88520 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Shoc2O88520 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Gm18959-201ENSMUST00000208954 655 ntBASIC17.13■□□□□ 0.33
Shoc2O88520 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Shoc2O88520 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shoc2O88520 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Shoc2O88520 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.12■□□□□ 0.33
Shoc2O88520 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Shoc2O88520 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Shoc2O88520 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.12■□□□□ 0.33
Shoc2O88520 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.12■□□□□ 0.33
Shoc2O88520 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shoc2O88520 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shoc2O88520 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.12■□□□□ 0.33
Shoc2O88520 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.12■□□□□ 0.33
Shoc2O88520 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shoc2O88520 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Shoc2O88520 Dancr-204ENSMUST00000132389 2347 ntBASIC17.12■□□□□ 0.33
Shoc2O88520 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shoc2O88520 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shoc2O88520 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.11■□□□□ 0.33
Shoc2O88520 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shoc2O88520 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shoc2O88520 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shoc2O88520 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shoc2O88520 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Shoc2O88520 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.11■□□□□ 0.33
Shoc2O88520 Mir5130-201ENSMUST00000175160 84 ntBASIC17.11■□□□□ 0.33
Shoc2O88520 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
Shoc2O88520 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.11■□□□□ 0.33
Shoc2O88520 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.11■□□□□ 0.33
Shoc2O88520 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shoc2O88520 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shoc2O88520 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms