Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ercc2O08811 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ercc2O08811 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ercc2O08811 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Gm13836-201ENSMUST00000121159 501 ntBASIC16.98■□□□□ 0.31
Ercc2O08811 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.98■□□□□ 0.31
Ercc2O08811 Gm18421-201ENSMUST00000204122 625 ntBASIC16.98■□□□□ 0.31
Ercc2O08811 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.98■□□□□ 0.31
Ercc2O08811 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.98■□□□□ 0.31
Ercc2O08811 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ercc2O08811 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Haglr-201ENSMUST00000100000 2085 ntBASIC16.98■□□□□ 0.31
Ercc2O08811 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ercc2O08811 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Ercc2O08811 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.97■□□□□ 0.31
Ercc2O08811 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ercc2O08811 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.97■□□□□ 0.31
Ercc2O08811 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.97■□□□□ 0.31
Ercc2O08811 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ercc2O08811 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.97■□□□□ 0.31
Ercc2O08811 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.97■□□□□ 0.31
Ercc2O08811 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ercc2O08811 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.97■□□□□ 0.31
Ercc2O08811 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.96■□□□□ 0.31
Ercc2O08811 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ercc2O08811 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ercc2O08811 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.96■□□□□ 0.31
Ercc2O08811 Gm37722-201ENSMUST00000193757 208 ntBASIC16.96■□□□□ 0.31
Ercc2O08811 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.96■□□□□ 0.31
Ercc2O08811 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ercc2O08811 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ercc2O08811 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Ercc2O08811 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ercc2O08811 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ercc2O08811 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ercc2O08811 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ercc2O08811 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ercc2O08811 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.96■□□□□ 0.3
Ercc2O08811 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Ercc2O08811 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ercc2O08811 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ercc2O08811 Gm11355-201ENSMUST00000121120 306 ntBASIC16.95■□□□□ 0.3
Ercc2O08811 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ercc2O08811 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ercc2O08811 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms