Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNA1AO00555 AL591424.1-201ENST00000442569 1213 ntBASIC18.34■□□□□ 0.53
CACNA1AO00555 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.34■□□□□ 0.53
CACNA1AO00555 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA1AO00555 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA1AO00555 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.33■□□□□ 0.53
CACNA1AO00555 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA1AO00555 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.33■□□□□ 0.53
CACNA1AO00555 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.33■□□□□ 0.53
CACNA1AO00555 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA1AO00555 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.33■□□□□ 0.53
CACNA1AO00555 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CACNA1AO00555 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.33■□□□□ 0.52
CACNA1AO00555 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.33■□□□□ 0.52
CACNA1AO00555 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 SCARNA2-201ENST00000458748 420 ntBASIC18.33■□□□□ 0.52
CACNA1AO00555 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 AL356488.2-201ENST00000602755 427 ntBASIC18.33■□□□□ 0.52
CACNA1AO00555 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.33■□□□□ 0.52
CACNA1AO00555 KRT8P41-201ENST00000533985 1514 ntBASIC18.33■□□□□ 0.52
CACNA1AO00555 ZNF259P1-201ENST00000407656 1365 ntBASIC18.33■□□□□ 0.52
CACNA1AO00555 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.33■□□□□ 0.52
CACNA1AO00555 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CACNA1AO00555 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA1AO00555 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA1AO00555 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CACNA1AO00555 MED15P5-201ENST00000423150 992 ntBASIC18.32■□□□□ 0.52
CACNA1AO00555 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CACNA1AO00555 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.32■□□□□ 0.52
CACNA1AO00555 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CACNA1AO00555 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA1AO00555 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA1AO00555 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA1AO00555 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA1AO00555 AC211486.1-202ENST00000416371 468 ntBASIC18.32■□□□□ 0.52
CACNA1AO00555 AC004832.2-201ENST00000426397 482 ntBASIC18.32■□□□□ 0.52
CACNA1AO00555 AC211476.1-201ENST00000503899 468 ntBASIC18.32■□□□□ 0.52
CACNA1AO00555 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.32■□□□□ 0.52
CACNA1AO00555 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.32■□□□□ 0.52
CACNA1AO00555 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.32■□□□□ 0.52
CACNA1AO00555 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA1AO00555 KRT18P28-201ENST00000453838 1332 ntBASIC18.32■□□□□ 0.52
CACNA1AO00555 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CACNA1AO00555 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA1AO00555 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA1AO00555 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.31■□□□□ 0.52
CACNA1AO00555 IGHV3-47-201ENST00000425060 335 ntBASIC18.31■□□□□ 0.52
CACNA1AO00555 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.31■□□□□ 0.52
CACNA1AO00555 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA1AO00555 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CACNA1AO00555 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
CACNA1AO00555 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.31■□□□□ 0.52
CACNA1AO00555 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.31■□□□□ 0.52
CACNA1AO00555 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.31■□□□□ 0.52
CACNA1AO00555 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CACNA1AO00555 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CACNA1AO00555 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.31■□□□□ 0.52
CACNA1AO00555 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA1AO00555 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CACNA1AO00555 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CACNA1AO00555 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.3■□□□□ 0.52
CACNA1AO00555 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.3■□□□□ 0.52
CACNA1AO00555 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1AO00555 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1AO00555 MIR3687-2-201ENST00000577708 61 ntBASIC18.3■□□□□ 0.52
CACNA1AO00555 MIR3687-1-201ENST00000614492 61 ntBASIC18.3■□□□□ 0.52
CACNA1AO00555 FAM197Y3-203ENST00000618346 717 ntBASIC18.3■□□□□ 0.52
CACNA1AO00555 MIR1199-201ENST00000621445 119 ntBASIC18.3■□□□□ 0.52
CACNA1AO00555 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.3■□□□□ 0.52
CACNA1AO00555 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1AO00555 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms