Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4lE9Q2N0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4lE9Q2N0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Haglr-201ENSMUST00000100000 2085 ntBASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cpsf4lE9Q2N0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Gm29707-201ENSMUST00000196325 491 ntBASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpsf4lE9Q2N0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.02□□□□□ -0.16
Cpsf4lE9Q2N0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Gm6659-201ENSMUST00000174752 547 ntBASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms