Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12d-1A0N8R0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Gm10602-201ENSMUST00000098239 609 ntBASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12d-1A0N8R0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12d-1A0N8R0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Il3ra-202ENSMUST00000223589 738 ntBASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12d-1A0N8R0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav12d-1A0N8R0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms