Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv17A0A140T8P8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv17A0A140T8P8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv17A0A140T8P8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms