Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-55A0A075B5W6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm26039-201ENSMUST00000158152 144 ntBASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm9987-201ENSMUST00000069768 567 ntBASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-55A0A075B5W6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-55A0A075B5W6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-55A0A075B5W6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-55A0A075B5W6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Gm27389-201ENSMUST00000183622 195 ntBASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-55A0A075B5W6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms