Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.71□□□□□ -1.82
KCNIP3Q9Y2W7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KCNIP3Q9Y2W7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 RNU6-252P-201ENST00000363232 107 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 RPL23AP26-201ENST00000412728 464 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AL031736.2-201ENST00000426573 787 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 BMS1P19-201ENST00000433925 393 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AL513321.1-201ENST00000441175 761 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC006326.1-201ENST00000445465 787 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC010733.1-201ENST00000451515 401 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC079841.1-201ENST00000481228 950 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 FTH1P24-201ENST00000503502 462 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC025260.1-201ENST00000548858 430 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC093014.1-201ENST00000548926 724 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 RPL23AP97-201ENST00000568955 471 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC018618.2-201ENST00000604770 446 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 Z98200.1-201ENST00000607298 470 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC019278.1-201ENST00000623516 479 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AP000843.1-201ENST00000624880 701 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 U3.53-201ENST00000628922 216 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 AC022031.1-201ENST00000585985 2593 ntBASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCNIP3Q9Y2W7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 LINC00622-201ENST00000562811 1570 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 RN7SKP162-201ENST00000363605 345 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 MIR142-201ENST00000384835 87 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC099535.1-201ENST00000408928 371 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AP000357.1-201ENST00000409926 1165 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 RNU2-6P-201ENST00000411404 190 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 MTND2P15-201ENST00000418575 892 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 FAR1P1-201ENST00000427163 934 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 GSTA7P-201ENST00000438425 448 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 MTCO3P43-201ENST00000440974 771 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 TPTE2P6-202ENST00000445572 1007 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC069540.1-201ENST00000446320 988 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AL500527.1-201ENST00000448532 255 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 OR1H1P-201ENST00000448731 937 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 RPL37P3-201ENST00000456825 293 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC079804.1-201ENST00000461922 436 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 RPL36AP41-201ENST00000493820 306 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 RN7SKP147-201ENST00000517154 244 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 IGKV2-18-201ENST00000522607 343 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 CIR1P1-201ENST00000524055 1133 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 MORF4L1P3-201ENST00000525966 950 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC141257.3-201ENST00000572906 215 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC011477.5-201ENST00000586571 259 ntBASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.69□□□□□ -1.82
KCNIP3Q9Y2W7 PCNAP1-202ENST00000595299 752 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms