Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL356967.1-201ENST00000406305 431 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC092647.1-201ENST00000420654 287 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 RPL35AP12-201ENST00000425362 338 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 HMGB1P45-201ENST00000435986 653 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 DNAJC19P5-201ENST00000443295 316 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AL161636.2-201ENST00000445179 927 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC023274.2-201ENST00000445264 521 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 RPL7P12-201ENST00000446719 750 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC073594.1-201ENST00000462065 364 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 CCDC11P1-201ENST00000503137 1162 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 MTND6P8-201ENST00000503471 522 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 MRPS35P2-201ENST00000508242 191 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 SNORA18.6-201ENST00000516792 115 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC027308.1-201ENST00000517993 110 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC109635.4-202ENST00000531666 412 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC090236.2-201ENST00000587933 1101 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 NPIPB1P-202ENST00000588786 828 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AL162413.1-201ENST00000603198 110 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC005014.2-201ENST00000607795 599 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 Z69720.2-201ENST00000624755 279 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 GUCY1B2-204ENST00000531898 1979 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 AC012078.1-201ENST00000405035 1646 ntBASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.96□□□□□ -1.14
PDZRN3Q9UPQ7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 Y_RNA.1-201ENST00000352915 104 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 RNA5SP477-201ENST00000362639 119 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-451P-201ENST00000362921 107 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 RNA5SP478-201ENST00000364657 115 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AL360271.1-201ENST00000395679 510 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 RNU4-64P-201ENST00000410795 131 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 RPS12P24-201ENST00000412619 387 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 UBE2V1P14-201ENST00000415815 558 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 PGBD4P3-201ENST00000440731 581 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 FABP3P2-201ENST00000453169 399 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 RPS27AP3-201ENST00000453803 454 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC091685.2-201ENST00000454924 864 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 SNRPFP4-201ENST00000456366 242 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 ACA64.1-201ENST00000459171 127 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 snoU109.1-201ENST00000459339 135 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC011476.1-201ENST00000466725 307 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 RNA5SP340-201ENST00000517132 107 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC022868.1-201ENST00000517767 391 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 OR4H6P-201ENST00000563771 921 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC137800.2-201ENST00000574375 120 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 MIR3189-201ENST00000578735 73 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 Z84480.1-201ENST00000605131 311 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 AC080078.3-201ENST00000605407 463 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 OR51C1P-201ENST00000608504 942 ntBASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDZRN3Q9UPQ7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 AOX3P-204ENST00000491025 2107 ntBASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
PDZRN3Q9UPQ7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms