Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC105129.1-201ENST00000560250 297 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC079880.2-201ENST00000603790 1213 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 Z73965.1-201ENST00000623412 2297 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 NOL8P1-201ENST00000508336 3529 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 SAMMSON-226ENST00000642089 1582 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC132825.1-201ENST00000463573 2247 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 RNU6-252P-201ENST00000363232 107 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 MIR122-201ENST00000385044 85 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL024507.1-201ENST00000412741 274 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL445183.3-201ENST00000414168 502 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 RPA2P2-201ENST00000419698 796 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL606495.1-201ENST00000422100 813 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC093084.1-201ENST00000424233 687 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC011242.1-201ENST00000433596 1158 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC112498.1-201ENST00000444401 332 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL096829.2-201ENST00000446582 742 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL157827.1-201ENST00000447622 132 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 RPL7P55-201ENST00000450522 746 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC006517.1-201ENST00000480485 328 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC146944.2-203ENST00000502493 354 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 OR5H3P-201ENST00000502817 919 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 TPT1P8-201ENST00000510120 555 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC139495.1-202ENST00000513164 354 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 IGLV2-28-201ENST00000520681 304 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC138701.1-201ENST00000524329 714 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC007225.2-201ENST00000562529 256 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC245884.10-201ENST00000597355 337 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC025946.2-201ENST00000603398 234 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC112503.2-201ENST00000609005 552 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AP005229.2-201ENST00000609980 697 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 MIR7702-201ENST00000621931 59 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 RPL23AP61-201ENST00000623642 466 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 AC004808.1-201ENST00000627671 721 ntBASIC4.24□□□□□ -1.73
NDE1Q9NXR1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
NDE1Q9NXR1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RNA5SP502-201ENST00000362694 119 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RNU6-481P-201ENST00000384194 107 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 MIR223-201ENST00000385204 110 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 MT-TP-201ENST00000387461 68 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RNU6-1000P-201ENST00000391066 106 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 BX664727.1-201ENST00000416024 466 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RWDD4P2-201ENST00000426392 563 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AL132765.1-201ENST00000434165 553 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RPS18P6-201ENST00000476880 458 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RN7SL727P-201ENST00000482164 296 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC072052.1-201ENST00000496556 306 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.23□□□□□ -1.73
NDE1Q9NXR1 AC007016.1-201ENST00000512110 244 ntBASIC4.23□□□□□ -1.73
NDE1Q9NXR1 RNU5A-7P-201ENST00000515979 116 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms