Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC009518.3-201ENST00000438972 253 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AMYP1-201ENST00000440059 1023 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 H2AFZP6-201ENST00000444403 394 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 VN1R17P-201ENST00000472048 1090 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC026254.2-201ENST00000475295 371 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC098818.1-201ENST00000478593 252 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RN7SL379P-201ENST00000479912 293 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RN7SL868P-201ENST00000485915 303 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-885P-201ENST00000516607 104 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC013244.1-201ENST00000604279 193 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC111186.1-201ENST00000604684 130 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AL355816.1-201ENST00000607951 118 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AP004247.3-201ENST00000608682 624 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MIR6885-201ENST00000612241 66 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC243654.2-201ENST00000612843 443 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC211486.4-201ENST00000621495 113 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC099494.2-201ENST00000623371 978 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC034229.6-201ENST00000623704 224 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AL033543.1-201ENST00000623440 13454 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-582P-201ENST00000362989 107 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 U3.23-201ENST00000391132 200 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 RPS12P24-201ENST00000412619 387 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 BOLA3P4-201ENST00000418151 400 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AL356276.2-201ENST00000435919 558 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 PCBP2P1-201ENST00000437262 977 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 LSM1P1-201ENST00000438629 273 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 FABP5P2-201ENST00000439042 408 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 TXNP5-201ENST00000441043 315 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 BNIP3P2-201ENST00000441221 577 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AL390728.3-201ENST00000452704 270 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 BTF3P5-201ENST00000457252 467 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 RN7SL393P-201ENST00000463588 296 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AC097493.1-201ENST00000463958 372 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 MTATP8P1-201ENST00000467115 207 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 AP003385.3-201ENST00000472498 287 ntBASIC6.67□□□□□ -1.34
CUEDC1Q9NWM3 RN7SL350P-201ENST00000492591 299 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms