Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RLIMQ9NVW2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.03□□□□□ -1.6
RLIMQ9NVW2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
RLIMQ9NVW2 MTND4P34-201ENST00000572715 1371 ntBASIC5.03□□□□□ -1.6
RLIMQ9NVW2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.03□□□□□ -1.6
RLIMQ9NVW2 AC022031.1-201ENST00000585985 2593 ntBASIC5.03□□□□□ -1.6
RLIMQ9NVW2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RLIMQ9NVW2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RLIMQ9NVW2 KARSP3-201ENST00000571212 1504 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 Y_RNA.302-201ENST00000364997 102 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RN7SKP186-201ENST00000365371 303 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RNU6-1122P-201ENST00000384449 107 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RNU6-192P-201ENST00000391253 100 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RPL23AP29-201ENST00000397284 453 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 GAPDHP42-201ENST00000406848 981 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RPL12P9-201ENST00000412942 488 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 DPPA2P2-201ENST00000418220 897 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 HSPD1P12-201ENST00000429127 1069 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RPL19P16-201ENST00000433839 588 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 MTND4P6-201ENST00000438297 472 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RPL36AP39-201ENST00000445859 318 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 NPM1P39-201ENST00000449818 867 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC108463.1-201ENST00000450258 347 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC094085.1-201ENST00000468914 584 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC104689.1-201ENST00000473356 768 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC098976.1-201ENST00000513014 541 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 RN7SKP70-201ENST00000516655 271 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AP000859.1-201ENST00000525536 307 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC027026.1-201ENST00000532323 742 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 NMNAT1P5-201ENST00000559657 841 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 SULT1C2P2-201ENST00000562517 294 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 MTCYBP13-201ENST00000578634 1093 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 PSMA6P4-201ENST00000603247 718 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC092354.1-201ENST00000606057 376 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC116651.1-201ENST00000609724 556 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC092650.2-201ENST00000619984 902 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC009878.1-201ENST00000621819 340 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC091932.2-201ENST00000623014 291 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC011755.1-201ENST00000623763 2049 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 TCP11X1-202ENST00000622971 1372 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 AC134882.1-201ENST00000603738 1676 ntBASIC5.02□□□□□ -1.61
RLIMQ9NVW2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RLIMQ9NVW2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms