Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 IPO8P1-201ENST00000455509 3109 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 RNU6-213P-201ENST00000384051 104 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 RAB9AP4-201ENST00000415230 609 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC013470.3-201ENST00000420252 1194 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC087650.1-201ENST00000431445 468 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 RPS17P13-201ENST00000448974 407 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC068587.1-201ENST00000483613 781 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC139783.2-201ENST00000504847 1145 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC010460.1-201ENST00000507087 466 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 OR4A12P-201ENST00000530847 918 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 MRPS35P3-201ENST00000603189 709 ntBASIC4.17□□□□□ -1.74
CISHQ9NSE2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.17□□□□□ -1.74
CISHQ9NSE2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CISHQ9NSE2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 SNORA68.2-201ENST00000391263 128 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 AL450992.3-201ENST00000413192 568 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 OR13Z1P-201ENST00000416141 834 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC004552.1-201ENST00000419089 348 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 NANOGP6-201ENST00000429190 847 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AP000942.1-201ENST00000463969 747 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 RPS26P3-201ENST00000470205 348 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC090543.2-201ENST00000483963 348 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC004057.1-201ENST00000485827 348 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC107918.3-201ENST00000533272 382 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 NPM1P47-201ENST00000560843 856 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 AC015726.1-201ENST00000602353 681 ntBASIC4.16□□□□□ -1.74
CISHQ9NSE2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CISHQ9NSE2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CISHQ9NSE2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.16□□□□□ -1.74
CISHQ9NSE2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CISHQ9NSE2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CISHQ9NSE2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CISHQ9NSE2 LINC01109-201ENST00000603837 3081 ntBASIC4.15□□□□□ -1.74
CISHQ9NSE2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CISHQ9NSE2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CISHQ9NSE2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CISHQ9NSE2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CISHQ9NSE2 RNA5SP97-201ENST00000365006 84 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CISHQ9NSE2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CISHQ9NSE2 RN7SKP263-201ENST00000411194 309 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.15□□□□□ -1.75
CISHQ9NSE2 AC092647.1-201ENST00000420654 287 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 AC007064.3-201ENST00000422608 359 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 EIF2S2P3-201ENST00000428356 999 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.15□□□□□ -1.75
CISHQ9NSE2 VN1R105P-201ENST00000486595 910 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.15□□□□□ -1.75
CISHQ9NSE2 TOMM20P2-201ENST00000540082 421 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 AC053481.4-201ENST00000583164 216 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 OR1AB1P-201ENST00000585564 761 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 AL137072.1-201ENST00000603444 466 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 AC233280.2-201ENST00000603917 1070 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 AC000123.3-201ENST00000624029 4975 ntBASIC4.15□□□□□ -1.75
CISHQ9NSE2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CISHQ9NSE2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CISHQ9NSE2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
CISHQ9NSE2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms