Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RSPO3Q9BXY4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
RSPO3Q9BXY4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC092162.3-201ENST00000624511 1624 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC116667.1-201ENST00000604855 2072 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AP000542.2-201ENST00000623199 6179 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 FAM3C2-201ENST00000312214 681 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 RNA5SP509-201ENST00000364577 119 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 RNA5SP366-201ENST00000365454 123 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 SNORA57.1-201ENST00000391227 145 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 RN7SKP182-201ENST00000410772 298 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 RPL12P34-201ENST00000424532 479 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 BTF3P10-201ENST00000433415 495 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 RPS20P1-201ENST00000434853 354 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AL451050.1-201ENST00000450126 415 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 NUTF2P7-201ENST00000453086 375 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC091167.1-201ENST00000492017 396 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 HPRT1P2-201ENST00000505250 544 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 PSMB7P1-201ENST00000556349 514 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC022968.1-201ENST00000567372 442 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 SNORD39.2-201ENST00000579995 76 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 MIR3138-201ENST00000585238 82 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AC005962.2-201ENST00000611427 652 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 AP005264.7-201ENST00000625003 745 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 MFSD8-220ENST00000641243 1422 ntBASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO3Q9BXY4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 LAP3P1-201ENST00000403648 294 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 MIR1193-201ENST00000408109 78 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 COX6B1P7-201ENST00000430845 235 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AL356276.2-201ENST00000435919 558 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC069285.2-201ENST00000440210 275 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC239367.2-201ENST00000447309 705 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 RNU6-775P-201ENST00000459318 96 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC020898.1-201ENST00000474167 787 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 RPL7P24-201ENST00000493052 752 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC008676.3-201ENST00000521237 435 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 DEFB109D-201ENST00000529497 240 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC012417.1-201ENST00000582307 1039 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AP005212.4-201ENST00000614206 710 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 MLECP1-201ENST00000615893 709 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AC068724.3-201ENST00000625906 87 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 MIR6715B-201ENST00000637172 77 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AL445437.1-201ENST00000623157 3087 ntBASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO3Q9BXY4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms