Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 AC008725.1-201ENST00000605123 2263 ntBASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC28BQ9BUN5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 HSPA8P1-201ENST00000425843 1833 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC010928.1-201ENST00000592477 1447 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 RPS26P13-201ENST00000419030 330 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC093084.1-201ENST00000424233 687 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 UBE2D3P3-201ENST00000426992 425 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC006517.1-201ENST00000480485 328 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 SUMO1P1-201ENST00000497904 306 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 MTCO2P9-201ENST00000503214 694 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC021146.7-201ENST00000509604 775 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 EDDM3DP-201ENST00000554692 434 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC009117.1-201ENST00000563948 554 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC018552.3-201ENST00000567416 561 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 MIR3667-201ENST00000581025 74 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC017076.1-201ENST00000607613 578 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AP000240.1-201ENST00000609910 452 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AP000943.4-201ENST00000622912 357 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 AL592437.2-201ENST00000421655 2434 ntBASIC4.23□□□□□ -1.73
CCDC28BQ9BUN5 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 RPS4XP5-202ENST00000449995 1334 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 BDP1P-201ENST00000582658 1990 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC022893.2-201ENST00000564832 3296 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 RNU6-792P-201ENST00000363490 107 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 Z98941.1-201ENST00000407764 100 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AL450992.3-201ENST00000413192 568 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 COX6B1P1-201ENST00000415962 213 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AL161631.1-201ENST00000417933 486 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 MTCYBP7-201ENST00000419540 1134 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 MTND4LP13-201ENST00000425022 298 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 ATP5HP2-201ENST00000433885 485 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 MTCYBP29-201ENST00000436327 1006 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 FHP1-201ENST00000442741 703 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC092691.2-201ENST00000461787 803 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC063943.1-201ENST00000465434 453 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 RPL7P16-201ENST00000479738 738 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC092902.1-201ENST00000486999 259 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 RN7SL812P-201ENST00000493791 279 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 OR5AZ1P-201ENST00000527448 943 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC093014.1-201ENST00000548926 724 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms