Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNX18P24-201ENST00000505249 671 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 RNU6-120P-201ENST00000516077 103 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC044860.3-201ENST00000559957 368 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 MIR5192-201ENST00000579892 92 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 SNORD58B-201ENST00000607313 66 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 FAM27E3-202ENST00000614611 340 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL049794.2-201ENST00000616301 365 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL606534.2-204ENST00000635008 178 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL596275.2-208ENST00000641192 594 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 SPATA31C1-201ENST00000420021 3895 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 AL138713.1-201ENST00000624026 2130 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 AP000547.3-204ENST00000588548 2523 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 Y_RNA.106-201ENST00000363189 100 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 PPIAP26-201ENST00000377951 522 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 Y_RNA.576-201ENST00000384781 102 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 PPIAP30-201ENST00000415473 519 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 RPL36P1-201ENST00000419720 225 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC139712.2-201ENST00000424302 339 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 RPL23AP50-201ENST00000434149 455 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 RAC1P7-201ENST00000445367 377 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC112492.4-201ENST00000456549 352 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 RN7SL654P-201ENST00000479178 292 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC079944.1-201ENST00000485426 495 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC114801.2-201ENST00000503825 781 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC006070.1-201ENST00000508151 193 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC104806.1-201ENST00000508720 308 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 MTND1P19-201ENST00000511780 315 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC018797.3-201ENST00000513388 1241 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 DCAF13P2-201ENST00000514188 555 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 IGHV3-76-201ENST00000522465 295 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC100784.1-201ENST00000522790 310 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 HSBP1P1-201ENST00000555205 166 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 EXOSC3P2-201ENST00000594464 497 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC020910.3-201ENST00000603701 874 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 AC055839.1-201ENST00000634467 498 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 ZNF402P-201ENST00000404435 3100 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 NXPH1-205ENST00000602349 1953 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 PSMC1P7-201ENST00000495689 1315 ntBASIC6.73□□□□□ -1.33
USB1Q9BQ65 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
USB1Q9BQ65 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USB1Q9BQ65 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AP002370.1-201ENST00000528055 1602 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 AC016930.1-201ENST00000468766 2205 ntBASIC6.72□□□□□ -1.33
USB1Q9BQ65 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
USB1Q9BQ65 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
USB1Q9BQ65 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms