Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC006064.5-201ENST00000541782 248 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 EIF1AXP2-201ENST00000555940 413 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 BMS1P7-201ENST00000602440 1052 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL354984.3-201ENST00000604803 325 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC078899.5-201ENST00000612475 178 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AL121890.3-201ENST00000618494 516 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC008785.1-201ENST00000624475 456 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.99□□□□□ -1.77
COL21A1Q96P44 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL21A1Q96P44 AC007390.2-201ENST00000606229 3803 ntBASIC3.99□□□□□ -1.77
COL21A1Q96P44 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL21A1Q96P44 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL21A1Q96P44 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL21A1Q96P44 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL21A1Q96P44 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 RNU4-23P-201ENST00000362839 140 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 RNU6-819P-201ENST00000364116 107 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 BTF3P9-201ENST00000418784 283 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AL592293.2-201ENST00000422292 996 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 MTCO1P45-201ENST00000431457 267 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 RN7SL303P-201ENST00000469773 251 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 NDUFA5P9-201ENST00000472609 340 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC025554.1-201ENST00000505641 188 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 NPM1P35-201ENST00000533043 868 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AL109766.1-201ENST00000555080 552 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC027176.2-201ENST00000559166 746 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 AL023583.1-201ENST00000607518 1143 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 AC138907.10-201ENST00000623708 983 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL21A1Q96P44 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
COL21A1Q96P44 USP9YP4-201ENST00000424401 1745 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 HSPD1P11-201ENST00000508643 1702 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 AL451142.2-201ENST00000429076 2090 ntBASIC3.98□□□□□ -1.77
COL21A1Q96P44 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 NOL8P1-201ENST00000508336 3529 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL21A1Q96P44 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL21A1Q96P44 RAC1P3-201ENST00000416129 580 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 P2RY10P2-201ENST00000416730 913 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 COX6CP17-201ENST00000421389 185 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 C4BPAP2-201ENST00000428434 478 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 RPS3AP54-201ENST00000435535 734 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC073143.1-201ENST00000436316 395 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 ACTR3P2-201ENST00000439585 1257 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 CASP3P1-201ENST00000446037 609 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 AL162388.1-201ENST00000450912 352 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 HMGB3P22-202ENST00000451823 572 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AL354710.1-201ENST00000453641 246 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 RPS20P4-201ENST00000461659 355 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC091917.2-201ENST00000505002 744 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 PSMB7P1-201ENST00000556349 514 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 SS18L2P2-201ENST00000583960 235 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 MTCO2P22-201ENST00000603246 681 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 AP003497.2-201ENST00000624220 967 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC011944.2-201ENST00000624440 683 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 AL139254.3-201ENST00000641097 674 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms