Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL7AP61-201ENST00000443410 636 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.89□□□□□ -1.47
ERCC4Q92889 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ERCC4Q92889 GAPDHP39-201ENST00000481866 979 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.89□□□□□ -1.47
ERCC4Q92889 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 OR5AZ1P-201ENST00000527448 943 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 HIGD1AP17-201ENST00000554576 276 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AC006349.1-201ENST00000555526 235 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AC122134.1-201ENST00000565664 1104 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AC005341.1-201ENST00000571086 708 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 RN7SL753P-201ENST00000581238 290 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 VN1R82P-201ENST00000601481 356 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.89□□□□□ -1.47
ERCC4Q92889 RN7SKP299-201ENST00000606679 301 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 AC007494.3-201ENST00000624660 743 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.89□□□□□ -1.47
ERCC4Q92889 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.89□□□□□ -1.47
ERCC4Q92889 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
ERCC4Q92889 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ERCC4Q92889 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.89□□□□□ -1.47
ERCC4Q92889 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
ERCC4Q92889 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
ERCC4Q92889 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.88□□□□□ -1.47
ERCC4Q92889 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.88□□□□□ -1.47
ERCC4Q92889 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 RNA5SP335-201ENST00000363817 110 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 RNU6-931P-201ENST00000363850 107 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 RNU4-75P-201ENST00000364621 146 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 HSPA8P15-201ENST00000401676 786 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AL031577.2-201ENST00000404133 280 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 U3.32-201ENST00000408116 212 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 P2RY10P2-201ENST00000416730 913 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 CDY14P-201ENST00000431260 1014 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 MTND4P6-201ENST00000438297 472 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AL450263.2-201ENST00000439400 589 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC073909.1-201ENST00000447112 999 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 OR52J1P-201ENST00000450596 932 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 CDY23P-201ENST00000451661 1014 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.88□□□□□ -1.47
ERCC4Q92889 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC104689.1-201ENST00000473356 768 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 RN7SL717P-201ENST00000478343 297 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.88□□□□□ -1.47
ERCC4Q92889 WBP1LP4-201ENST00000505043 344 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC079395.1-201ENST00000510981 262 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AP002812.4-201ENST00000532139 286 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ERCC4Q92889 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC4Q92889 RPL10P14-201ENST00000565265 298 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC079171.1-201ENST00000568788 914 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC4Q92889 RN7SL708P-201ENST00000580952 299 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC4Q92889 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC008814.1-201ENST00000603797 406 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AL451074.6-201ENST00000608512 729 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC103591.3-201ENST00000608684 209 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC073114.1-201ENST00000612027 490 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AL158063.1-201ENST00000615349 536 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AL356274.1-201ENST00000617064 410 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC121761.2-201ENST00000617300 689 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC006840.1-201ENST00000623069 542 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AC092184.1-201ENST00000625042 715 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC093536.2-201ENST00000565257 1406 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms