Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL935212.3-201ENST00000450729 284 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC098799.3-201ENST00000506095 438 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 BNIP3P38-201ENST00000601117 544 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AL391358.1-201ENST00000605342 190 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 Mico1.1-201ENST00000611698 204 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AL158196.1-201ENST00000616786 434 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC112694.2-201ENST00000623697 768 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AL391684.1-202ENST00000641293 1636 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 AC093311.1-201ENST00000506586 2021 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 GTF2H2B-203ENST00000508065 1432 ntBASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A1Q8WWI5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC018529.3-201ENST00000624212 2254 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 SAMMSON-226ENST00000642089 1582 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AL450326.2-201ENST00000421913 1962 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RNU1-108P-201ENST00000362556 161 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RNA5SP123-201ENST00000363244 119 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RNA5SP27-201ENST00000363839 119 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RNU6-236P-201ENST00000363886 106 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC013404.1-201ENST00000413068 249 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 USP9YP21-201ENST00000420603 432 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RPS12P5-201ENST00000423449 371 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 OR2B7P-201ENST00000429302 934 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 VN1R54P-201ENST00000435210 1049 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RPS27AP15-201ENST00000447672 466 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AL031313.1-201ENST00000448435 256 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 ISCUP1-201ENST00000454451 448 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 RNU6-276P-201ENST00000516114 96 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC107918.3-201ENST00000533272 382 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC096586.1-201ENST00000610267 561 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC023509.5-201ENST00000617434 807 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC009704.2-201ENST00000618739 483 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC091905.2-201ENST00000623143 306 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 LINC01355-201ENST00000566551 5444 ntBASIC4.62□□□□□ -1.67
SLC44A1Q8WWI5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 AC103591.2-201ENST00000265259 766 ntBASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 RNA5SP22-201ENST00000365393 109 ntBASIC4.61□□□□□ -1.67
SLC44A1Q8WWI5 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms