Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL445584.1-201ENST00000431451 330 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 RANP8-201ENST00000444720 713 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AC091516.1-201ENST00000549191 703 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AC063950.1-201ENST00000552036 308 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 TMEM30CP-203ENST00000637814 1035 ntBASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
SHROOM3Q8TF72 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 MIR200C-201ENST00000384980 68 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC083863.1-201ENST00000438811 231 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 FCF1P7-201ENST00000451185 558 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 RPS27AP13-201ENST00000498403 237 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC079171.1-201ENST00000568788 914 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC112230.1-201ENST00000604342 547 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC074276.2-201ENST00000619891 348 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AL669942.2-201ENST00000620352 697 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 Z92545.1-201ENST00000411782 234 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AC068020.1-201ENST00000594215 661 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 OR7A8P-201ENST00000595427 913 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 AL159169.3-201ENST00000608871 561 ntBASIC4.13□□□□□ -1.75
SHROOM3Q8TF72 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC005332.5-201ENST00000591222 2919 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 RNU1-132P-201ENST00000364300 164 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 RN7SKP159-201ENST00000410657 292 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 OR2X1P-201ENST00000421144 687 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 RPL7P1-201ENST00000468161 747 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 RPL7P9-201ENST00000468715 747 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 RPS4XP15-201ENST00000489210 795 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC006499.5-201ENST00000505037 514 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC026403.1-201ENST00000518938 295 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC022655.2-201ENST00000577280 318 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC016839.1-201ENST00000578162 867 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 SNORA51-201ENST00000606420 132 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC012314.7-201ENST00000619693 93 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 AC099654.11-201ENST00000638857 294 ntBASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.12□□□□□ -1.75
SHROOM3Q8TF72 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC139426.3-201ENST00000605648 2059 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC019072.1-201ENST00000604535 1551 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC017007.4-201ENST00000503353 1352 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms