Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 EIF1P3-201ENST00000423841 334 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC073387.1-201ENST00000453261 709 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC106707.2-201ENST00000484182 374 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP446-201ENST00000515955 82 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC012493.2-201ENST00000595083 291 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 MIR432-201ENST00000606207 94 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC015813.6-201ENST00000624409 5808 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 EOGT-210ENST00000615922 1931 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 MIR195-201ENST00000385194 87 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC073587.1-201ENST00000447093 876 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC090013.1-201ENST00000485147 480 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC091516.1-201ENST00000549191 703 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC079171.1-201ENST00000568788 914 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC010653.1-201ENST00000571108 881 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC009229.4-201ENST00000623854 1947 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 BNIP3P41-201ENST00000503774 571 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP179-201ENST00000517284 121 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC006960.3-201ENST00000561845 705 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AP005205.1-201ENST00000563503 508 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AL031666.3-201ENST00000609320 1006 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 MTCO1P22-201ENST00000604619 1360 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 Z82217.1-201ENST00000625157 8149 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC004448.2-201ENST00000422360 586 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 RN7SL429P-201ENST00000479090 223 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 RN7SL489P-201ENST00000486185 223 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 RN7SL327P-201ENST00000488659 223 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC020893.1-201ENST00000502452 580 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 MIR5187-201ENST00000583479 76 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 RN7SL853P-201ENST00000617250 223 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 AC139426.3-201ENST00000605648 2059 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 PROS2P-201ENST00000474651 1951 ntBASIC2.69□□□□□ -1.98
ALMS1Q8TCU4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 RPL21P23-201ENST00000446654 460 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC005726.1-201ENST00000494679 427 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 RFPL4AP5-201ENST00000514977 504 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC090136.1-201ENST00000520009 240 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms