Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC015908.5-201ENST00000623289 343 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AL049536.1-201ENST00000625043 744 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC244205.2-202ENST00000635781 342 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 MFSD8-220ENST00000641243 1422 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 ERCC6-202ENST00000374127 1782 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC074029.4-201ENST00000624796 1859 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC115285.1-201ENST00000424879 736 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AL157831.1-201ENST00000426134 473 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC009263.1-201ENST00000441193 1239 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 RN7SL809P-201ENST00000482040 297 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC018797.3-201ENST00000513388 1241 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC023813.4-201ENST00000607580 580 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC100847.1-201ENST00000611316 481 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC140479.6-201ENST00000633535 357 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC139713.2-214ENST00000642059 1811 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 AC093311.1-201ENST00000506586 2021 ntBASIC4.5□□□□□ -1.69
CCDC112Q8NEF3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 MIR331-201ENST00000362302 94 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 RPL5P19-201ENST00000404228 893 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC010307.1-201ENST00000467206 836 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 RN7SKP122-201ENST00000515923 296 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 RNU6-943P-201ENST00000516960 98 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AL020997.2-201ENST00000602607 184 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC008782.1-201ENST00000603386 430 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AC113403.1-201ENST00000604910 193 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 AL445423.1-201ENST00000609941 536 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 MIR6830-201ENST00000636015 70 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 USP9YP4-201ENST00000424401 1745 ntBASIC4.49□□□□□ -1.69
CCDC112Q8NEF3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 MIR3074-201ENST00000384885 81 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AC023141.6-201ENST00000429418 337 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AC011998.1-201ENST00000433403 117 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AL500522.2-201ENST00000448562 343 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AC138701.1-201ENST00000524329 714 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AP001804.2-201ENST00000533932 910 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 EIF1P6-201ENST00000600054 334 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms