Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC093311.1-201ENST00000506586 2021 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AL022311.1-201ENST00000623726 19416 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AL121886.1-201ENST00000358609 435 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 RNA5SP28-201ENST00000363841 119 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 OR8V1P-201ENST00000395193 873 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AL358176.3-201ENST00000420757 454 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 MTND4P32-201ENST00000437189 1237 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AL117351.1-201ENST00000438864 766 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC009263.1-201ENST00000441193 1239 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 MTND1P29-201ENST00000448112 647 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 TRBV8-2-201ENST00000475637 270 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC126121.1-201ENST00000482313 553 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC091167.1-201ENST00000492017 396 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 RPF2P2-201ENST00000504693 896 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 MRPS33P2-201ENST00000507850 322 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC023632.1-201ENST00000518463 375 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC005191.1-201ENST00000603950 358 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC121247.2-201ENST00000604776 136 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AL157770.1-201ENST00000623049 439 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC006484.1-201ENST00000435086 1884 ntBASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SMC1BQ8NDV3 AC068870.1-201ENST00000563737 2455 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 VPS35P1-201ENST00000563400 1518 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 MIR1302-8-201ENST00000408342 128 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 CEACAMP8-201ENST00000413902 580 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 MORF4L1P6-201ENST00000418771 268 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 RPL7P53-201ENST00000421245 739 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 MTND4P20-201ENST00000424125 869 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 RIMKLBP2-201ENST00000424737 654 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC022022.1-201ENST00000430304 178 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 USP24P1-201ENST00000433802 779 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 OR7E125P-201ENST00000443450 846 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 DNAJC19P8-201ENST00000452887 259 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 NIP7P2-201ENST00000485801 544 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 OR5H4P-201ENST00000510851 923 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC090819.1-201ENST00000523800 1111 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC137627.1-201ENST00000545761 289 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC008015.1-201ENST00000555505 465 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC053481.3-201ENST00000577881 843 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC022884.3-201ENST00000579571 248 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms