Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 RN7SKP56-201ENST00000410513 331 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 RN7SKP17-201ENST00000411242 351 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC234781.4-201ENST00000419384 244 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 RPL21P32-201ENST00000419877 477 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC009237.2-201ENST00000421358 284 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 OR8F1P-201ENST00000425243 930 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 ISCA1P1-201ENST00000426679 387 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 NPM1P22-201ENST00000427761 952 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 HMGB3P10-201ENST00000434734 572 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 RPS3AP38-201ENST00000435889 763 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 ARAFP2-201ENST00000440565 559 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 YWHAQP9-201ENST00000445891 512 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 VN1R10P-201ENST00000447106 875 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC004129.2-201ENST00000457229 287 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC023141.9-201ENST00000458734 412 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 KRT19P6-201ENST00000510983 209 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC239860.2-201ENST00000525886 270 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC087276.1-201ENST00000529659 480 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 OR4A45P-201ENST00000529954 901 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 DEFB108A-201ENST00000530110 222 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 SNORD95-201ENST00000579879 68 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC090312.2-201ENST00000582687 378 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC083760.1-201ENST00000589621 670 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 FO393422.1-201ENST00000603908 708 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AP002360.3-201ENST00000607673 710 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 MIR6768-201ENST00000610734 72 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 RNA5SP440-201ENST00000612665 119 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC008115.3-201ENST00000614874 549 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC027807.2-201ENST00000616099 408 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC018816.2-201ENST00000621460 353 ntBASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM48Q8IWZ4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 GTF2IP4-201ENST00000453092 2054 ntBASIC5.59□□□□□ -1.52
TRIM48Q8IWZ4 ELF2P3-201ENST00000445099 1506 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AC138907.8-201ENST00000623981 2256 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AL159987.1-201ENST00000347911 293 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 RN7SKP226-201ENST00000364912 300 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AC104297.1-201ENST00000393779 870 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AL139098.1-201ENST00000407291 389 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AC002524.1-201ENST00000411687 547 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AC022022.1-201ENST00000430304 178 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 UBE2FP3-201ENST00000436366 524 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AL831737.1-201ENST00000441288 271 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AC005297.1-201ENST00000444765 862 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 VN1R34P-201ENST00000447387 883 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 AC003071.1-201ENST00000451219 789 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 FGF7P6-202ENST00000451282 293 ntBASIC5.58□□□□□ -1.52
TRIM48Q8IWZ4 KLF3P2-201ENST00000465138 268 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms