Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN1BQ07699 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SCN1BQ07699 RN7SKP160-201ENST00000363804 340 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 RN7SKP15-201ENST00000364742 309 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 LRRC37BP1-201ENST00000398851 714 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 MIR921-201ENST00000401133 56 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 MIR1182-201ENST00000408363 97 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AC092638.1-201ENST00000411966 1275 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 AL024507.1-201ENST00000412741 274 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AC108075.1-201ENST00000424692 529 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 AC013262.1-201ENST00000426710 252 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 OR51AB1P-201ENST00000429046 620 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN1BQ07699 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN1BQ07699 H2AFZP5-201ENST00000446960 382 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 RPS17P2-201ENST00000461663 408 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN1BQ07699 RPL21P103-201ENST00000479921 488 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 AC012158.1-204ENST00000483430 465 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 RPL7L1P4-201ENST00000513004 707 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 RNA5SP154-201ENST00000516193 111 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 RNU2-30P-201ENST00000516209 141 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 Y_RNA.719-201ENST00000517156 106 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN1BQ07699 AC083899.3-201ENST00000603413 594 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 AC087783.2-201ENST00000605070 562 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 AC006065.5-201ENST00000623427 349 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 AC080188.3-201ENST00000624842 748 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN1BQ07699 CASC19-264ENST00000641912 1184 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.28□□□□□ -1.72
SCN1BQ07699 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SCN1BQ07699 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN1BQ07699 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN1BQ07699 NMD3P1-201ENST00000439704 1488 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN1BQ07699 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN1BQ07699 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN1BQ07699 HSPD1P14-201ENST00000432666 1618 ntBASIC4.28□□□□□ -1.72
SCN1BQ07699 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.28□□□□□ -1.73
SCN1BQ07699 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SCN1BQ07699 RNU5B-4P-201ENST00000363508 111 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 SNORA70.10-201ENST00000384515 134 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 MIR143-201ENST00000385300 106 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 ENSAP1-201ENST00000392855 326 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AL035405.1-201ENST00000400795 710 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 BTBD10P2-201ENST00000404779 676 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AL080315.1-201ENST00000406055 466 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 DUTP5-201ENST00000406790 469 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 RNA5SP104-201ENST00000410989 118 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 RN7SKP216-201ENST00000411050 312 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 GTF3AP1-201ENST00000416942 1004 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 OR2AM1P-201ENST00000422137 422 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 PSMA2P3-201ENST00000429685 675 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 UBE2V1P1-201ENST00000430836 445 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AL391987.1-201ENST00000441025 200 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 SNORD108-201ENST00000459332 71 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 RPS18P6-201ENST00000476880 458 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 GAPDHP36-201ENST00000480688 918 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 RN7SL214P-201ENST00000487317 265 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN1BQ07699 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCN1BQ07699 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.27□□□□□ -1.73
SCN1BQ07699 AC093755.1-201ENST00000512950 1023 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 OR5AZ1P-201ENST00000527448 943 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AP003066.2-201ENST00000529375 555 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC087894.1-201ENST00000538359 518 ntBASIC4.27□□□□□ -1.73
SCN1BQ07699 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms