Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.37□□□□□ -2.03
HSPG2P98160 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.37□□□□□ -2.03
HSPG2P98160 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC2.37□□□□□ -2.03
HSPG2P98160 AL121603.1-201ENST00000553815 142 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 NCAPGP2-201ENST00000557911 754 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.37□□□□□ -2.03
HSPG2P98160 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HSPG2P98160 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.37□□□□□ -2.03
HSPG2P98160 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 AL513548.1-201ENST00000562904 1724 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HSPG2P98160 MIR1911-201ENST00000410783 80 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 AL591419.1-201ENST00000427423 339 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 RPS26P2-201ENST00000440331 348 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 AL049874.2-201ENST00000492636 288 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.37□□□□□ -2.03
HSPG2P98160 EIF5A2P1-201ENST00000564027 460 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 ATP5A1P2-202ENST00000616464 443 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 UBA52P6-201ENST00000399822 382 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 ZNF602P-201ENST00000405929 924 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC010342.1-201ENST00000514047 877 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 RNA5SP249-201ENST00000516127 99 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.36□□□□□ -2.03
HSPG2P98160 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC2.36□□□□□ -2.03
HSPG2P98160 MIR5004-201ENST00000579078 107 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC002069.2-201ENST00000603580 883 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 SNORD35B-201ENST00000363660 87 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 RNA5SP187-201ENST00000384400 119 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 PGBD4P8-201ENST00000412993 562 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.36□□□□□ -2.03
HSPG2P98160 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 AC022695.1-201ENST00000522089 237 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC113192.3-201ENST00000529152 742 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.36□□□□□ -2.03
HSPG2P98160 MIR3162-201ENST00000581818 82 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.36□□□□□ -2.03
HSPG2P98160 AC104763.2-201ENST00000604179 382 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
HSPG2P98160 AL034403.1-201ENST00000399414 885 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 RAD23BP3-201ENST00000454157 1152 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC084198.1-201ENST00000477747 402 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC103843.2-201ENST00000530523 682 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.36□□□□□ -2.03
HSPG2P98160 UBE2NP1-201ENST00000545592 458 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AL359219.2-201ENST00000555184 348 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.36□□□□□ -2.03
HSPG2P98160 AL121576.1-201ENST00000556055 276 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.36□□□□□ -2.03
HSPG2P98160 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 AL390838.2-201ENST00000602394 274 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC2.36□□□□□ -2.03
HSPG2P98160 SRP72P2-201ENST00000344851 1979 ntBASIC2.36□□□□□ -2.03
HSPG2P98160 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HSPG2P98160 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
HSPG2P98160 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 AC004448.2-201ENST00000422360 586 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 AC091862.1-201ENST00000438016 1100 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms