Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CCL20P78556 RIOK3P1-201ENST00000418778 1528 ntBASIC3.11□□□□□ -1.91
CCL20P78556 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 U3.25-201ENST00000391209 220 ntBASIC3.11□□□□□ -1.91
CCL20P78556 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.11□□□□□ -1.91
CCL20P78556 RN7SKP106-201ENST00000410832 272 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.11□□□□□ -1.91
CCL20P78556 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.11□□□□□ -1.91
CCL20P78556 RPL23AP46-201ENST00000438548 490 ntBASIC3.11□□□□□ -1.91
CCL20P78556 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.11□□□□□ -1.91
CCL20P78556 RPS17P13-201ENST00000448974 407 ntBASIC3.11□□□□□ -1.91
CCL20P78556 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.11□□□□□ -1.91
CCL20P78556 MRPS31P2-201ENST00000451581 518 ntBASIC3.11□□□□□ -1.91
CCL20P78556 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 RPL7P16-201ENST00000479738 738 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC083982.1-201ENST00000485679 344 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC005912.1-201ENST00000495392 255 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.11□□□□□ -1.91
CCL20P78556 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.11□□□□□ -1.91
CCL20P78556 AC110775.1-201ENST00000513721 462 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.11□□□□□ -1.91
CCL20P78556 OR5AZ1P-201ENST00000527448 943 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC005000.1-201ENST00000536192 288 ntBASIC3.11□□□□□ -1.91
CCL20P78556 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.11□□□□□ -1.91
CCL20P78556 AC090877.1-201ENST00000561418 344 ntBASIC3.11□□□□□ -1.91
CCL20P78556 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 AC022655.2-201ENST00000577280 318 ntBASIC3.11□□□□□ -1.91
CCL20P78556 RN7SL690P-201ENST00000582087 240 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.11□□□□□ -1.91
CCL20P78556 AC084373.1-201ENST00000603311 235 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AL031320.1-201ENST00000604177 357 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AL365503.1-201ENST00000605247 905 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC012213.4-201ENST00000606457 354 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AL096803.3-201ENST00000609032 532 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC100847.1-201ENST00000611316 481 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AC087385.3-201ENST00000620477 187 ntBASIC3.11□□□□□ -1.91
CCL20P78556 AL049536.1-201ENST00000625043 744 ntBASIC3.11□□□□□ -1.91
CCL20P78556 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 AC073073.2-201ENST00000609827 2578 ntBASIC3.11□□□□□ -1.91
CCL20P78556 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CCL20P78556 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.11□□□□□ -1.91
CCL20P78556 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.11□□□□□ -1.91
CCL20P78556 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCL20P78556 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.1□□□□□ -1.91
CCL20P78556 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCL20P78556 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCL20P78556 AC007529.1-201ENST00000418574 2178 ntBASIC3.1□□□□□ -1.91
CCL20P78556 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCL20P78556 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCL20P78556 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCL20P78556 RNU1-14P-201ENST00000362759 152 ntBASIC3.1□□□□□ -1.91
CCL20P78556 RN7SKP149-201ENST00000363008 344 ntBASIC3.1□□□□□ -1.91
CCL20P78556 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 MIR765-201ENST00000390226 114 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AL049697.2-201ENST00000403708 294 ntBASIC3.1□□□□□ -1.91
CCL20P78556 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 HMGB1P32-201ENST00000425971 565 ntBASIC3.1□□□□□ -1.91
CCL20P78556 FTH1P6-201ENST00000430768 320 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.1□□□□□ -1.91
CCL20P78556 NDUFA5P1-201ENST00000433858 341 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AL359265.2-201ENST00000434367 631 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 OR6C72P-201ENST00000451403 892 ntBASIC3.1□□□□□ -1.91
CCL20P78556 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCL20P78556 RPL12P20-201ENST00000475538 479 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AC011005.3-201ENST00000491624 395 ntBASIC3.1□□□□□ -1.91
CCL20P78556 RPS27AP16-201ENST00000492222 470 ntBASIC3.1□□□□□ -1.91
CCL20P78556 USP9YP5-201ENST00000511770 630 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.1□□□□□ -1.91
CCL20P78556 RNA5SP519-201ENST00000516480 119 ntBASIC3.1□□□□□ -1.91
CCL20P78556 NDUFB9P3-201ENST00000521269 501 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.1□□□□□ -1.91
CCL20P78556 MIR4458-201ENST00000578872 75 ntBASIC3.1□□□□□ -1.91
CCL20P78556 VN1R84P-201ENST00000593697 235 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.1□□□□□ -1.91
CCL20P78556 AC113403.1-201ENST00000604910 193 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AP005019.3-201ENST00000620418 560 ntBASIC3.1□□□□□ -1.91
CCL20P78556 AC009452.1-201ENST00000640823 606 ntBASIC3.1□□□□□ -1.91
CCL20P78556 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCL20P78556 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCL20P78556 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.1□□□□□ -1.91
CCL20P78556 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCL20P78556 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.1□□□□□ -1.91
CCL20P78556 AC100871.1-201ENST00000507871 1456 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms