Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TPM4P67936 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TPM4P67936 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
TPM4P67936 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
TPM4P67936 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.49□□□□□ -1.69
TPM4P67936 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TPM4P67936 AL021368.2-201ENST00000606125 5352 ntBASIC4.49□□□□□ -1.69
TPM4P67936 AC009229.4-201ENST00000623854 1947 ntBASIC4.49□□□□□ -1.69
TPM4P67936 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TPM4P67936 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TPM4P67936 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM4P67936 NRBF2P2-201ENST00000413087 861 ntBASIC4.49□□□□□ -1.69
TPM4P67936 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.49□□□□□ -1.69
TPM4P67936 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.49□□□□□ -1.69
TPM4P67936 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM4P67936 RPEP3-201ENST00000425462 676 ntBASIC4.49□□□□□ -1.69
TPM4P67936 RPL23AP4-201ENST00000427757 463 ntBASIC4.49□□□□□ -1.69
TPM4P67936 IFNNP1-201ENST00000429219 553 ntBASIC4.49□□□□□ -1.69
TPM4P67936 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM4P67936 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.49□□□□□ -1.69
TPM4P67936 VN1R96P-201ENST00000446052 858 ntBASIC4.49□□□□□ -1.69
TPM4P67936 AC018638.3-201ENST00000461273 132 ntBASIC4.49□□□□□ -1.69
TPM4P67936 AC092691.2-201ENST00000461787 803 ntBASIC4.49□□□□□ -1.69
TPM4P67936 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM4P67936 NIPA2P2-201ENST00000496376 1083 ntBASIC4.49□□□□□ -1.69
TPM4P67936 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM4P67936 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.49□□□□□ -1.69
TPM4P67936 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.49□□□□□ -1.69
TPM4P67936 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.49□□□□□ -1.69
TPM4P67936 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TPM4P67936 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM4P67936 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.49□□□□□ -1.69
TPM4P67936 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.49□□□□□ -1.69
TPM4P67936 Z82195.1-201ENST00000604558 398 ntBASIC4.49□□□□□ -1.69
TPM4P67936 AC114878.2-201ENST00000604863 1251 ntBASIC4.49□□□□□ -1.69
TPM4P67936 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TPM4P67936 AL035461.2-201ENST00000619201 524 ntBASIC4.49□□□□□ -1.69
TPM4P67936 U7.8-201ENST00000619968 63 ntBASIC4.49□□□□□ -1.69
TPM4P67936 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TPM4P67936 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
TPM4P67936 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM4P67936 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
TPM4P67936 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TPM4P67936 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.48□□□□□ -1.69
TPM4P67936 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM4P67936 AC110792.3-201ENST00000595906 1614 ntBASIC4.48□□□□□ -1.69
TPM4P67936 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TPM4P67936 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TPM4P67936 HMGN2P8-201ENST00000391458 268 ntBASIC4.48□□□□□ -1.69
TPM4P67936 RPL7AP73-201ENST00000413490 353 ntBASIC4.48□□□□□ -1.69
TPM4P67936 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.48□□□□□ -1.69
TPM4P67936 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.48□□□□□ -1.69
TPM4P67936 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM4P67936 AL360081.1-201ENST00000428299 555 ntBASIC4.48□□□□□ -1.69
TPM4P67936 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.48□□□□□ -1.69
TPM4P67936 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.48□□□□□ -1.69
TPM4P67936 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM4P67936 RNA5SP246-201ENST00000458909 119 ntBASIC4.48□□□□□ -1.69
TPM4P67936 RN7SL93P-201ENST00000463035 293 ntBASIC4.48□□□□□ -1.69
TPM4P67936 RPS27AP16-201ENST00000492222 470 ntBASIC4.48□□□□□ -1.69
TPM4P67936 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM4P67936 MTND1P6-201ENST00000523621 946 ntBASIC4.48□□□□□ -1.69
TPM4P67936 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TPM4P67936 AC044860.2-201ENST00000561005 179 ntBASIC4.48□□□□□ -1.69
TPM4P67936 MIR4436B2-201ENST00000581415 91 ntBASIC4.48□□□□□ -1.69
TPM4P67936 MIR4436B1-201ENST00000583272 91 ntBASIC4.48□□□□□ -1.69
TPM4P67936 MIR5684-201ENST00000585074 65 ntBASIC4.48□□□□□ -1.69
TPM4P67936 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.48□□□□□ -1.69
TPM4P67936 AL161616.1-201ENST00000611867 286 ntBASIC4.48□□□□□ -1.69
TPM4P67936 AC018445.2-201ENST00000622987 260 ntBASIC4.48□□□□□ -1.69
TPM4P67936 AL139254.3-201ENST00000641097 674 ntBASIC4.48□□□□□ -1.69
TPM4P67936 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
TPM4P67936 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.48□□□□□ -1.69
TPM4P67936 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.48□□□□□ -1.69
TPM4P67936 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 MIR129-1-201ENST00000384972 72 ntBASIC4.47□□□□□ -1.69
TPM4P67936 RNU6-233P-201ENST00000410845 141 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AC093084.1-201ENST00000424233 687 ntBASIC4.47□□□□□ -1.69
TPM4P67936 USP9YP9-201ENST00000429406 715 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AL358472.1-201ENST00000431295 329 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AC092013.1-201ENST00000438795 332 ntBASIC4.47□□□□□ -1.69
TPM4P67936 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 AC110749.1-201ENST00000462007 357 ntBASIC4.47□□□□□ -1.69
TPM4P67936 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM4P67936 RN7SL691P-201ENST00000494487 301 ntBASIC4.47□□□□□ -1.69
TPM4P67936 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM4P67936 KRT19P6-201ENST00000510983 209 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.47□□□□□ -1.69
TPM4P67936 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.47□□□□□ -1.69
TPM4P67936 NPM1P35-201ENST00000533043 868 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AL109741.3-201ENST00000561748 592 ntBASIC4.47□□□□□ -1.69
TPM4P67936 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM4P67936 RPL12P25-202ENST00000598100 674 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms