Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.49
RHBDL3P58872 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
RHBDL3P58872 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RHBDL3P58872 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
RHBDL3P58872 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RHBDL3P58872 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RHBDL3P58872 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RHBDL3P58872 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RHBDL3P58872 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDL3P58872 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RHBDL3P58872 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 FABP12P1-201ENST00000401911 322 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.71□□□□□ -1.5
RHBDL3P58872 OR51A3P-201ENST00000413596 924 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 TCEA1P2-201ENST00000420496 906 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 AL354766.1-201ENST00000423396 542 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 NAP1L1P3-201ENST00000462291 880 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 RPL6P9-201ENST00000466502 859 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.71□□□□□ -1.5
RHBDL3P58872 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.71□□□□□ -1.5
RHBDL3P58872 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 AC073073.1-201ENST00000493920 463 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 Y_RNA.719-201ENST00000517156 106 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 RNU6-709P-201ENST00000517257 104 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 AC034205.1-201ENST00000520621 638 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 HIGD1AP6-201ENST00000521833 279 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 AC138701.1-201ENST00000524329 714 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 SNORA74C-1-201ENST00000580726 201 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 MIR4715-201ENST00000584117 79 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.71□□□□□ -1.5
RHBDL3P58872 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 AP004247.3-201ENST00000608682 624 ntBASIC5.71□□□□□ -1.5
RHBDL3P58872 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.71□□□□□ -1.5
RHBDL3P58872 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.71□□□□□ -1.5
RHBDL3P58872 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.71□□□□□ -1.5
RHBDL3P58872 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RHBDL3P58872 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDL3P58872 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 KARSP3-201ENST00000571212 1504 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 RNA5SP391-201ENST00000363456 119 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 RNA5SP397-201ENST00000391323 118 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 RPL21P67-201ENST00000402896 478 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDL3P58872 PCNPP4-201ENST00000414817 517 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 USP9YP21-201ENST00000420603 432 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.7□□□□□ -1.5
RHBDL3P58872 RPL18P10-201ENST00000425606 538 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 HMGN2P27-201ENST00000427352 270 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDL3P58872 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 RPS27AP15-201ENST00000447672 466 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 RPL23AP15-201ENST00000450202 459 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 AC104982.1-201ENST00000478775 574 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 RPS27P23-201ENST00000487608 251 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AK3P4-201ENST00000504283 583 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 AC110792.2-201ENST00000510278 224 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AC010374.2-201ENST00000512933 535 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 SCARNA1-201ENST00000517138 166 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 RPL23AP53-201ENST00000521854 457 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AF279873.1-201ENST00000523393 313 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDL3P58872 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RHBDL3P58872 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDL3P58872 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.7□□□□□ -1.5
RHBDL3P58872 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.7□□□□□ -1.5
RHBDL3P58872 OR1AB1P-201ENST00000585564 761 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.7□□□□□ -1.5
RHBDL3P58872 AL606834.3-201ENST00000602615 496 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AC115621.1-201ENST00000604653 858 ntBASIC5.7□□□□□ -1.5
RHBDL3P58872 AC083809.1-201ENST00000615051 472 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms