Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.03□□□□□ -1.76
VSX2P58304 AC068831.8-201ENST00000620171 435 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AC067852.7-201ENST00000623270 535 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AL356121.2-201ENST00000624715 780 ntBASIC4.03□□□□□ -1.76
VSX2P58304 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.03□□□□□ -1.76
VSX2P58304 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.03□□□□□ -1.76
VSX2P58304 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
VSX2P58304 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
VSX2P58304 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VSX2P58304 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VSX2P58304 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
VSX2P58304 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX2P58304 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VSX2P58304 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 AC011155.1-201ENST00000316512 456 ntBASIC4.02□□□□□ -1.77
VSX2P58304 RNU1-15P-201ENST00000353977 144 ntBASIC4.02□□□□□ -1.77
VSX2P58304 RPS27AP11-201ENST00000402798 447 ntBASIC4.02□□□□□ -1.77
VSX2P58304 CASKP1-201ENST00000412870 582 ntBASIC4.02□□□□□ -1.77
VSX2P58304 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX2P58304 AL590806.1-201ENST00000415818 853 ntBASIC4.02□□□□□ -1.77
VSX2P58304 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX2P58304 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX2P58304 AL353748.1-201ENST00000440753 474 ntBASIC4.02□□□□□ -1.77
VSX2P58304 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.02□□□□□ -1.77
VSX2P58304 NDUFS5P3-201ENST00000450668 321 ntBASIC4.02□□□□□ -1.77
VSX2P58304 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX2P58304 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.02□□□□□ -1.77
VSX2P58304 RPL31P53-201ENST00000457065 348 ntBASIC4.02□□□□□ -1.77
VSX2P58304 PSMC1P13-201ENST00000458195 985 ntBASIC4.02□□□□□ -1.77
VSX2P58304 AL161747.1-201ENST00000480068 358 ntBASIC4.02□□□□□ -1.77
VSX2P58304 LARP7P4-201ENST00000481075 878 ntBASIC4.02□□□□□ -1.77
VSX2P58304 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 PRELID3BP7-201ENST00000503606 469 ntBASIC4.02□□□□□ -1.77
VSX2P58304 AC108145.1-201ENST00000503770 153 ntBASIC4.02□□□□□ -1.77
VSX2P58304 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 AC099522.1-202ENST00000514718 367 ntBASIC4.02□□□□□ -1.77
VSX2P58304 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.02□□□□□ -1.77
VSX2P58304 MTCO1P35-201ENST00000515270 228 ntBASIC4.02□□□□□ -1.77
VSX2P58304 AC027176.2-201ENST00000559166 746 ntBASIC4.02□□□□□ -1.77
VSX2P58304 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.02□□□□□ -1.77
VSX2P58304 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX2P58304 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX2P58304 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VSX2P58304 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.02□□□□□ -1.77
VSX2P58304 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VSX2P58304 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
VSX2P58304 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
VSX2P58304 Z73965.1-201ENST00000623412 2297 ntBASIC4.01□□□□□ -1.77
VSX2P58304 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.01□□□□□ -1.77
VSX2P58304 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.01□□□□□ -1.77
VSX2P58304 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.01□□□□□ -1.77
VSX2P58304 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.01□□□□□ -1.77
VSX2P58304 SNORD74.4-201ENST00000364129 80 ntBASIC4.01□□□□□ -1.77
VSX2P58304 GCNT6-201ENST00000379591 934 ntBASIC4.01□□□□□ -1.77
VSX2P58304 MIR1179-201ENST00000408703 91 ntBASIC4.01□□□□□ -1.77
VSX2P58304 RNA5SP39-201ENST00000411245 120 ntBASIC4.01□□□□□ -1.77
VSX2P58304 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 AC099063.2-201ENST00000446360 662 ntBASIC4.01□□□□□ -1.77
VSX2P58304 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 NUTF2P7-201ENST00000453086 375 ntBASIC4.01□□□□□ -1.77
VSX2P58304 AL121877.1-201ENST00000453704 622 ntBASIC4.01□□□□□ -1.77
VSX2P58304 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.01□□□□□ -1.77
VSX2P58304 RPS27AP13-201ENST00000498403 237 ntBASIC4.01□□□□□ -1.77
VSX2P58304 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.01□□□□□ -1.77
VSX2P58304 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.01□□□□□ -1.77
VSX2P58304 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 RN7SKP21-201ENST00000516503 220 ntBASIC4.01□□□□□ -1.77
VSX2P58304 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.01□□□□□ -1.77
VSX2P58304 AC008694.2-201ENST00000517591 306 ntBASIC4.01□□□□□ -1.77
VSX2P58304 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 AC109635.6-201ENST00000525487 1113 ntBASIC4.01□□□□□ -1.77
VSX2P58304 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.01□□□□□ -1.77
VSX2P58304 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 SNX6P1-201ENST00000601728 1224 ntBASIC4.01□□□□□ -1.77
VSX2P58304 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.01□□□□□ -1.77
VSX2P58304 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.01□□□□□ -1.77
VSX2P58304 AC068724.3-201ENST00000625906 87 ntBASIC4.01□□□□□ -1.77
VSX2P58304 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VSX2P58304 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VSX2P58304 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms