Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXA3P55318 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXA3P55318 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
FOXA3P55318 RNU4-7P-201ENST00000364758 141 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXA3P55318 SEPT7P2-202ENST00000398921 823 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 MIR298-201ENST00000401212 88 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 HLFP1-201ENST00000402375 499 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL049697.2-201ENST00000403708 294 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 MIR1251-201ENST00000408552 70 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXA3P55318 RPL30P2-201ENST00000414021 291 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL159169.1-201ENST00000421119 127 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AC079355.1-201ENST00000421770 223 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXA3P55318 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXA3P55318 SKP1P1-201ENST00000438081 489 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 RPL23AP52-201ENST00000439311 478 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 RPL36AP15-201ENST00000444514 266 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXA3P55318 CEACAMP4-201ENST00000457676 421 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 KCTD9P2-201ENST00000512203 1013 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXA3P55318 OR7H2P-201ENST00000513483 306 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXA3P55318 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.02□□□□□ -1.93
FOXA3P55318 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
FOXA3P55318 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.02□□□□□ -1.93
FOXA3P55318 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXA3P55318 RPL23AP87-202ENST00000573039 466 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AC091042.1-201ENST00000579213 173 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.02□□□□□ -1.93
FOXA3P55318 MIR4737-201ENST00000583979 81 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXA3P55318 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXA3P55318 ABI1P1-201ENST00000603375 1120 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL390816.3-201ENST00000604527 1066 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL445222.1-201ENST00000607259 628 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL096803.3-201ENST00000609032 532 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 FAM27D1-201ENST00000612308 341 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AC022467.1-201ENST00000614738 749 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AC090246.1-201ENST00000616499 426 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AP005019.3-201ENST00000620418 560 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL445363.3-201ENST00000623080 671 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AL049536.1-201ENST00000625043 744 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXA3P55318 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
FOXA3P55318 OR5AC4P-202ENST00000642086 985 ntBASIC3.02□□□□□ -1.93
FOXA3P55318 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
FOXA3P55318 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXA3P55318 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXA3P55318 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
FOXA3P55318 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA3P55318 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA3P55318 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA3P55318 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA3P55318 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA3P55318 RNA5SP435-201ENST00000364044 108 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 SNORD113.2-201ENST00000364166 89 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 RN7SKP213-201ENST00000410746 298 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 TMSB10P2-201ENST00000416049 131 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXA3P55318 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXA3P55318 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 HMGB3P5-201ENST00000428894 612 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXA3P55318 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 AL353093.1-201ENST00000441292 436 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC091685.2-201ENST00000454924 864 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA3P55318 HMGN2P7-201ENST00000456186 273 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC109327.1-201ENST00000471666 403 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC007537.2-201ENST00000472093 511 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA3P55318 AC004815.1-201ENST00000484185 331 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 RPL7P47-201ENST00000497299 556 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC109635.6-201ENST00000525487 1113 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 MIR4330-201ENST00000579077 105 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA3P55318 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 RN7SL690P-201ENST00000582087 240 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC069061.3-201ENST00000582254 823 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC005255.1-201ENST00000593748 216 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC115286.1-201ENST00000604298 434 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AL713998.2-201ENST00000604538 1198 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC113403.1-201ENST00000604910 193 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC015849.6-201ENST00000605454 474 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 AC100847.1-201ENST00000611316 481 ntBASIC3.01□□□□□ -1.93
FOXA3P55318 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA3P55318 AC022960.2-201ENST00000616300 666 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms