Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC105252.1-201ENST00000503089 286 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 OR5M14P-201ENST00000506803 618 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC093824.1-201ENST00000508796 343 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 MTND3P22-201ENST00000510932 243 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 IGHV3-32-201ENST00000519182 355 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.86□□□□□ -1.47
EPHB3P54753 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 AC044913.1-201ENST00000557200 430 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 AC055876.5-201ENST00000605667 259 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AP000238.1-201ENST00000608759 426 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHB3P54753 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHB3P54753 AF001550.2-201ENST00000636643 217 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 FAM157B-203ENST00000639350 358 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 LINC01739-205ENST00000641890 573 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 SAMMSON-227ENST00000642114 1199 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
EPHB3P54753 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 AC245100.2-201ENST00000454544 1679 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
EPHB3P54753 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 AL121977.1-201ENST00000401636 979 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 NCSTNP1-201ENST00000406229 144 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC010385.1-201ENST00000412374 256 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 RPS26P13-201ENST00000419030 330 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 RPL21P32-201ENST00000419877 477 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 AC073410.1-201ENST00000435125 589 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 TMX2P1-201ENST00000436507 708 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AL035407.2-201ENST00000454090 378 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 MTCO3P11-201ENST00000455103 774 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 RPL5P24-201ENST00000463742 885 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 MTND1P16-201ENST00000465177 898 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.85□□□□□ -1.47
EPHB3P54753 RPS3AP17-201ENST00000472594 777 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC107398.1-201ENST00000486904 505 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 RN7SL447P-201ENST00000494711 245 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 MTCYBP18-201ENST00000501056 747 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.85□□□□□ -1.47
EPHB3P54753 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 HIGD1AP14-201ENST00000507617 282 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.85□□□□□ -1.47
EPHB3P54753 HMGB1P44-201ENST00000508597 572 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC024589.1-201ENST00000512207 263 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 CENPUP1-201ENST00000526649 1202 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 PMS2P3-207ENST00000529061 717 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 AC005832.3-201ENST00000537929 631 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 OR7K1P-201ENST00000546439 926 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.85□□□□□ -1.47
EPHB3P54753 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHB3P54753 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.85□□□□□ -1.47
EPHB3P54753 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 AC000068.2-201ENST00000608816 460 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AL138960.1-201ENST00000613838 513 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC015722.2-201ENST00000622210 551 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 AC018445.2-201ENST00000622987 260 ntBASIC5.85□□□□□ -1.47
EPHB3P54753 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
EPHB3P54753 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.85□□□□□ -1.47
EPHB3P54753 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.85□□□□□ -1.47
EPHB3P54753 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EPHB3P54753 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.85□□□□□ -1.47
EPHB3P54753 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms