Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC006386.1-201ENST00000619436 415 ntBASIC5.33□□□□□ -1.56
NEK3P51956 RNU6-156P-201ENST00000621869 107 ntBASIC5.33□□□□□ -1.56
NEK3P51956 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.33□□□□□ -1.56
NEK3P51956 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
NEK3P51956 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEK3P51956 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEK3P51956 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEK3P51956 LINC01109-201ENST00000603837 3081 ntBASIC5.32□□□□□ -1.56
NEK3P51956 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.32□□□□□ -1.56
NEK3P51956 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.32□□□□□ -1.56
NEK3P51956 AC112198.2-201ENST00000426589 6996 ntBASIC5.32□□□□□ -1.56
NEK3P51956 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEK3P51956 AC000374.1-201ENST00000434698 1745 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AC019155.1-201ENST00000382242 574 ntBASIC5.32□□□□□ -1.56
NEK3P51956 MIR513B-201ENST00000385136 84 ntBASIC5.32□□□□□ -1.56
NEK3P51956 U3.36-201ENST00000408418 213 ntBASIC5.32□□□□□ -1.56
NEK3P51956 RN7SKP126-201ENST00000411143 300 ntBASIC5.32□□□□□ -1.56
NEK3P51956 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.32□□□□□ -1.56
NEK3P51956 MTCO2P21-201ENST00000419780 677 ntBASIC5.32□□□□□ -1.56
NEK3P51956 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NEK3P51956 MRPS36P1-201ENST00000421291 307 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AC009237.2-201ENST00000421358 284 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.32□□□□□ -1.56
NEK3P51956 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.32□□□□□ -1.56
NEK3P51956 MOB1AP1-201ENST00000430903 535 ntBASIC5.32□□□□□ -1.56
NEK3P51956 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.32□□□□□ -1.56
NEK3P51956 MTCO2P25-201ENST00000447065 681 ntBASIC5.32□□□□□ -1.56
NEK3P51956 RN7SL610P-201ENST00000463845 291 ntBASIC5.32□□□□□ -1.56
NEK3P51956 RPS20P21-201ENST00000466859 343 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AC108734.3-201ENST00000481241 1165 ntBASIC5.32□□□□□ -1.56
NEK3P51956 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.32□□□□□ -1.56
NEK3P51956 SNX5P1-201ENST00000505757 1041 ntBASIC5.32□□□□□ -1.56
NEK3P51956 OR5H4P-201ENST00000510851 923 ntBASIC5.32□□□□□ -1.56
NEK3P51956 GTF2F2P1-201ENST00000511083 675 ntBASIC5.32□□□□□ -1.56
NEK3P51956 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEK3P51956 AC093755.1-201ENST00000512950 1023 ntBASIC5.32□□□□□ -1.56
NEK3P51956 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.32□□□□□ -1.56
NEK3P51956 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.32□□□□□ -1.56
NEK3P51956 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.32□□□□□ -1.56
NEK3P51956 EIF5A2P1-201ENST00000564027 460 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AC023813.2-201ENST00000564321 469 ntBASIC5.32□□□□□ -1.56
NEK3P51956 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.32□□□□□ -1.56
NEK3P51956 AL158211.1-201ENST00000566763 763 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AP005119.2-201ENST00000579735 1105 ntBASIC5.32□□□□□ -1.56
NEK3P51956 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.32□□□□□ -1.56
NEK3P51956 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.32□□□□□ -1.56
NEK3P51956 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.32□□□□□ -1.56
NEK3P51956 BNIP3P26-201ENST00000600827 554 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.32□□□□□ -1.56
NEK3P51956 AC113368.1-201ENST00000603736 382 ntBASIC5.32□□□□□ -1.56
NEK3P51956 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.32□□□□□ -1.56
NEK3P51956 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.32□□□□□ -1.56
NEK3P51956 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.32□□□□□ -1.56
NEK3P51956 AC006927.4-201ENST00000639187 543 ntBASIC5.32□□□□□ -1.56
NEK3P51956 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
NEK3P51956 CASC19-222ENST00000641321 1173 ntBASIC5.32□□□□□ -1.56
NEK3P51956 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEK3P51956 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NEK3P51956 AC092747.4-201ENST00000620519 1861 ntBASIC5.32□□□□□ -1.56
NEK3P51956 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.32□□□□□ -1.56
NEK3P51956 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEK3P51956 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEK3P51956 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEK3P51956 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEK3P51956 RNU4-44P-201ENST00000363050 141 ntBASIC5.31□□□□□ -1.56
NEK3P51956 SNORA58B-201ENST00000364259 136 ntBASIC5.31□□□□□ -1.56
NEK3P51956 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NEK3P51956 AL645927.1-201ENST00000396783 406 ntBASIC5.31□□□□□ -1.56
NEK3P51956 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NEK3P51956 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.31□□□□□ -1.56
NEK3P51956 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.31□□□□□ -1.56
NEK3P51956 RPS24P7-201ENST00000416921 246 ntBASIC5.31□□□□□ -1.56
NEK3P51956 RPS3AP9-201ENST00000417027 792 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC104333.2-201ENST00000422630 192 ntBASIC5.31□□□□□ -1.56
NEK3P51956 GTF2IP23-201ENST00000423746 351 ntBASIC5.31□□□□□ -1.56
NEK3P51956 RPP40P1-201ENST00000426762 456 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.31□□□□□ -1.56
NEK3P51956 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.31□□□□□ -1.56
NEK3P51956 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.31□□□□□ -1.56
NEK3P51956 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.31□□□□□ -1.56
NEK3P51956 GAPDHP58-201ENST00000438477 1006 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AL450263.2-201ENST00000439400 589 ntBASIC5.31□□□□□ -1.56
NEK3P51956 ELOCP13-201ENST00000443934 329 ntBASIC5.31□□□□□ -1.56
NEK3P51956 CYCSP24-201ENST00000445119 316 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC004022.1-201ENST00000447766 1066 ntBASIC5.31□□□□□ -1.56
NEK3P51956 RPL7P31-201ENST00000450192 724 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC098826.2-201ENST00000452011 651 ntBASIC5.31□□□□□ -1.56
NEK3P51956 NDUFA5P7-201ENST00000452914 242 ntBASIC5.31□□□□□ -1.56
NEK3P51956 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms