Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL12P48061 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL12P48061 SNORA74D-201ENST00000516404 141 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.08□□□□□ -1.76
CXCL12P48061 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL12P48061 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.08□□□□□ -1.76
CXCL12P48061 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.08□□□□□ -1.76
CXCL12P48061 AC091516.1-201ENST00000549191 703 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.08□□□□□ -1.76
CXCL12P48061 AL121834.1-201ENST00000572284 509 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 MIR4472-2-201ENST00000582069 67 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CXCL12P48061 AC015726.1-201ENST00000602353 681 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 AC032011.1-201ENST00000611703 1549 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 MIR8069-1-201ENST00000616627 86 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 MIR8069-2-201ENST00000621412 86 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 AC019278.1-201ENST00000623516 479 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 AC093775.1-201ENST00000624154 1868 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL12P48061 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.08□□□□□ -1.76
CXCL12P48061 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CXCL12P48061 AL672167.1-205ENST00000641112 3080 ntBASIC4.08□□□□□ -1.76
CXCL12P48061 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CXCL12P48061 AC073346.2-201ENST00000624724 2058 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL12P48061 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 AP004289.2-201ENST00000444413 1457 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
CXCL12P48061 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CXCL12P48061 AL589994.1-201ENST00000404962 340 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 RNU2-65P-201ENST00000410162 185 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 AC114814.2-201ENST00000419195 485 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 AC092647.1-201ENST00000420654 287 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL12P48061 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL12P48061 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL12P48061 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL12P48061 AC104978.1-201ENST00000449387 391 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 AL451050.1-201ENST00000450126 415 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 RPL23AP65-201ENST00000475608 468 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 RPL21P6-201ENST00000479171 504 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL12P48061 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL12P48061 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL12P48061 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL12P48061 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL12P48061 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 AL008729.2-201ENST00000606393 473 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 AC005344.1-201ENST00000613391 459 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 AC015967.1-201ENST00000619893 476 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.07□□□□□ -1.76
CXCL12P48061 AL592182.3-201ENST00000642132 3304 ntBASIC4.07□□□□□ -1.76
CXCL12P48061 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL12P48061 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL12P48061 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL12P48061 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL12P48061 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL12P48061 AL929601.4-201ENST00000613011 1341 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL12P48061 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL12P48061 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL12P48061 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL12P48061 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL12P48061 RNA5SP72-201ENST00000364442 117 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 RNA5SP97-201ENST00000365006 84 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL12P48061 RPL21P17-201ENST00000397467 475 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CXCL12P48061 AL157385.1-201ENST00000446973 268 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 PTMAP3-201ENST00000447474 330 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 RPS11P1-201ENST00000451072 473 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 NANOGP10-201ENST00000453325 895 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL12P48061 RPL36AP13-201ENST00000457490 317 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AP002371.1-201ENST00000463604 433 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.06□□□□□ -1.76
CXCL12P48061 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL12P48061 RPS4XP18-201ENST00000495480 763 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL12P48061 RPS27AP18-201ENST00000515536 459 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms