Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD12P35452 RNA5SP455-201ENST00000365190 119 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 SNORA62-201ENST00000365493 153 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD12P35452 RNU6-398P-201ENST00000384143 109 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 Y_RNA.472-201ENST00000384322 102 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HOXD12P35452 ATP5F1P2-201ENST00000398143 760 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AL049545.1-201ENST00000401856 572 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AL136310.1-201ENST00000404926 654 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 HMGB3P18-201ENST00000406327 590 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 RPS16P5-201ENST00000406501 404 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 MIR1303-201ENST00000408625 86 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD12P35452 AC119751.6-201ENST00000416712 186 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD12P35452 AL031736.2-201ENST00000426573 787 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXD12P35452 RPS6P15-201ENST00000431996 751 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC091390.1-201ENST00000433904 331 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC084290.1-201ENST00000434995 374 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 Z83846.1-201ENST00000446798 265 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 HMGB3P21-201ENST00000452483 547 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 RN7SL385P-201ENST00000468873 276 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 TRBV8-2-201ENST00000475637 270 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC004263.1-201ENST00000479327 332 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 ARL4AP1-201ENST00000503220 705 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 HMGB1P1-201ENST00000522557 636 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD12P35452 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD12P35452 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD12P35452 AC091515.1-201ENST00000548110 679 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD12P35452 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD12P35452 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.14□□□□□ -1.59
HOXD12P35452 AL031320.1-201ENST00000604177 357 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD12P35452 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD12P35452 FRG1HP-204ENST00000617940 757 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD12P35452 AC135068.5-201ENST00000624197 983 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 AC016717.3-201ENST00000624730 554 ntBASIC5.14□□□□□ -1.59
HOXD12P35452 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD12P35452 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD12P35452 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD12P35452 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD12P35452 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD12P35452 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD12P35452 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HOXD12P35452 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HOXD12P35452 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD12P35452 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD12P35452 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD12P35452 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD12P35452 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD12P35452 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD12P35452 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD12P35452 AC079741.1-201ENST00000321498 212 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 RN7SKP113-201ENST00000363891 295 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD12P35452 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD12P35452 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HOXD12P35452 RN7SKP114-201ENST00000410327 279 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
HOXD12P35452 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXD12P35452 COX6CP17-201ENST00000421389 185 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 GTF2IP2-201ENST00000424290 697 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD12P35452 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD12P35452 AL592437.1-201ENST00000443781 492 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 SETD6P1-201ENST00000444575 317 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 HMGB3P6-201ENST00000444896 598 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC005410.1-202ENST00000460347 485 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AP000563.1-201ENST00000490865 758 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 RPL5P23-201ENST00000496040 868 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 RPS24P16-201ENST00000497294 392 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD12P35452 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD12P35452 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD12P35452 AC119751.1-201ENST00000513357 765 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC022360.1-201ENST00000521058 340 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD12P35452 OR4A2P-201ENST00000527276 913 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC022882.1-201ENST00000532142 501 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXD12P35452 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.13□□□□□ -1.59
HOXD12P35452 AC091042.1-201ENST00000579213 173 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXD12P35452 AC061975.8-201ENST00000587058 721 ntBASIC5.13□□□□□ -1.59
HOXD12P35452 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms