Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 RPL7P1-201ENST00000468161 747 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 RPL7P9-201ENST00000468715 747 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 SEPT7P6-201ENST00000469999 1143 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HOXC4P09017 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.12□□□□□ -1.75
HOXC4P09017 ACTR6P1-201ENST00000514311 1104 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 RNU6-551P-201ENST00000516661 103 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 RNU6-362P-201ENST00000516736 90 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 AC008694.2-201ENST00000517591 306 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.12□□□□□ -1.75
HOXC4P09017 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC4P09017 OR8X1P-201ENST00000534542 869 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC4P09017 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC4P09017 AC093227.2-201ENST00000589357 285 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 AC024941.1-201ENST00000612250 334 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 MIR7151-201ENST00000617477 60 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 AC015722.2-201ENST00000622210 551 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 AP002967.1-201ENST00000624203 539 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC4P09017 AC092162.3-201ENST00000624511 1624 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC4P09017 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC4P09017 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 AC110792.3-201ENST00000595906 1614 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC4P09017 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 SPRR2C-201ENST00000290702 219 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 RNU1-15P-201ENST00000353977 144 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 MIR448-201ENST00000362131 111 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC240504.1-201ENST00000395709 845 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AP000357.1-201ENST00000409926 1165 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC4P09017 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC4P09017 UBE2V2P3-201ENST00000433562 437 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AL356276.2-201ENST00000435919 558 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC4P09017 GEMIN8P3-201ENST00000445417 720 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC037198.2-201ENST00000478845 733 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC108145.1-201ENST00000503770 153 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC4P09017 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 AC108064.1-201ENST00000513791 460 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 snoU109.6-201ENST00000516831 118 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 AC100770.1-201ENST00000532310 322 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC084824.1-201ENST00000550917 1005 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 HMGB3P26-201ENST00000560051 582 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC4P09017 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC4P09017 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC4P09017 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXC4P09017 VN1R85P-201ENST00000601587 426 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC4P09017 GMCL1P2-201ENST00000605230 823 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC4P09017 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC4P09017 AC103798.2-201ENST00000624292 632 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 AL356121.2-201ENST00000624715 780 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 USP9YP4-201ENST00000424401 1745 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
HOXC4P09017 AL672167.1-203ENST00000641299 2975 ntBASIC4.11□□□□□ -1.75
HOXC4P09017 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC4P09017 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC4P09017 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC4P09017 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC4P09017 OR11H4-201ENST00000315409 1082 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 RNA5SP130-201ENST00000364431 114 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC4P09017 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC4P09017 AC104306.1-201ENST00000449702 371 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 RPL38P1-201ENST00000460914 211 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 RPL23AP2-201ENST00000471227 466 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 RN7SL809P-201ENST00000482040 297 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC4P09017 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXC4P09017 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC4P09017 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC4P09017 AC063950.1-201ENST00000552036 308 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC4P09017 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC4P09017 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC4P09017 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC4P09017 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC4P09017 AL356274.1-201ENST00000617064 410 ntBASIC4.1□□□□□ -1.75
HOXC4P09017 MIR7702-201ENST00000621931 59 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms