Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOAP06340 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOAP06340 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 CENPIP1-201ENST00000425713 902 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 HIGD1AP12-201ENST00000427832 281 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL035407.1-201ENST00000429211 571 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 ARL2BPP10-201ENST00000446487 531 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC104978.1-201ENST00000449387 391 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 NECAP1P2-201ENST00000455668 727 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 RNU7-125P-201ENST00000458760 62 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 MTND3P7-201ENST00000474435 343 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOAP06340 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 BTG4P1-201ENST00000510421 183 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 RN7SKP141-201ENST00000516167 338 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL354943.1-201ENST00000572103 781 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 RN7SL652P-201ENST00000577769 300 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 MIR4284-201ENST00000578924 81 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AP001094.1-201ENST00000579805 193 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC068020.1-201ENST00000594215 661 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC130352.1-201ENST00000602979 661 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC093765.1-201ENST00000603758 881 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC004492.1-201ENST00000607036 742 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC012557.1-201ENST00000607115 611 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL138478.1-201ENST00000612252 832 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL158163.2-201ENST00000619110 700 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 AL603755.1-201ENST00000619504 163 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 BX005214.3-202ENST00000619809 325 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOAP06340 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AC007342.7-201ENST00000624610 2337 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 AP005432.1-201ENST00000580891 3485 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOAP06340 KARSP3-201ENST00000571212 1504 ntBASIC5.64□□□□□ -1.51
HLA-DOAP06340 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 ZFRP1-201ENST00000457579 2970 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 BX005019.1-201ENST00000561881 1810 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 SNORD113.2-201ENST00000364166 89 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 SNORD116.1-201ENST00000365628 92 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 RNA5SP397-201ENST00000391323 118 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC007738.1-201ENST00000413892 348 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 BTF3P8-201ENST00000414577 526 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC016712.1-201ENST00000431088 378 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC244505.3-201ENST00000454598 187 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 OR52A4P-201ENST00000472867 958 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC008837.1-201ENST00000511513 412 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 SNORA31.13-201ENST00000516624 135 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 MTCYBP19-201ENST00000517463 1124 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 RPL23AP53-201ENST00000521854 457 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC104417.1-201ENST00000523974 751 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 FAM106CP-201ENST00000582212 507 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AL020997.3-201ENST00000602843 359 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC135507.1-201ENST00000607214 561 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms