Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
APOEP02649 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
APOEP02649 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
APOEP02649 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
APOEP02649 AC097504.1-201ENST00000515103 2415 ntBASIC4.33□□□□□ -1.72
APOEP02649 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
APOEP02649 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
APOEP02649 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
APOEP02649 RNU6-1279P-201ENST00000383917 103 ntBASIC4.33□□□□□ -1.72
APOEP02649 MT-RNR1-201ENST00000389680 954 ntBASIC4.33□□□□□ -1.72
APOEP02649 AC136624.1-201ENST00000400791 413 ntBASIC4.33□□□□□ -1.72
APOEP02649 AL607077.1-201ENST00000401718 499 ntBASIC4.33□□□□□ -1.72
APOEP02649 AL022722.2-201ENST00000402519 180 ntBASIC4.33□□□□□ -1.72
APOEP02649 RPS27AP11-201ENST00000402798 447 ntBASIC4.33□□□□□ -1.72
APOEP02649 RPL5P19-201ENST00000404228 893 ntBASIC4.33□□□□□ -1.72
APOEP02649 AL450992.3-201ENST00000413192 568 ntBASIC4.33□□□□□ -1.72
APOEP02649 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.33□□□□□ -1.72
APOEP02649 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.33□□□□□ -1.72
APOEP02649 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.33□□□□□ -1.72
APOEP02649 ELOCP18-201ENST00000434209 337 ntBASIC4.33□□□□□ -1.72
APOEP02649 ELOCP8-201ENST00000439309 332 ntBASIC4.33□□□□□ -1.72
APOEP02649 RPL23AP89-201ENST00000439324 255 ntBASIC4.33□□□□□ -1.72
APOEP02649 ELOCP15-201ENST00000442090 332 ntBASIC4.33□□□□□ -1.72
APOEP02649 SERPINA7P1-201ENST00000443077 631 ntBASIC4.33□□□□□ -1.72
APOEP02649 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.33□□□□□ -1.72
APOEP02649 AC114755.5-201ENST00000447760 831 ntBASIC4.33□□□□□ -1.72
APOEP02649 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.33□□□□□ -1.72
APOEP02649 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.33□□□□□ -1.72
APOEP02649 MTND6P32-201ENST00000457611 483 ntBASIC4.33□□□□□ -1.72
APOEP02649 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.33□□□□□ -1.72
APOEP02649 RN7SL604P-201ENST00000492589 296 ntBASIC4.33□□□□□ -1.72
APOEP02649 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.33□□□□□ -1.72
APOEP02649 IGHV3-63-201ENST00000518422 341 ntBASIC4.33□□□□□ -1.72
APOEP02649 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.33□□□□□ -1.72
APOEP02649 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.33□□□□□ -1.72
APOEP02649 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
APOEP02649 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.33□□□□□ -1.72
APOEP02649 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.33□□□□□ -1.72
APOEP02649 AC015849.6-201ENST00000605454 474 ntBASIC4.33□□□□□ -1.72
APOEP02649 AL135786.2-201ENST00000608422 615 ntBASIC4.33□□□□□ -1.72
APOEP02649 MIR6798-201ENST00000612887 67 ntBASIC4.33□□□□□ -1.72
APOEP02649 AC016588.2-201ENST00000632484 3021 ntBASIC4.33□□□□□ -1.72
APOEP02649 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
APOEP02649 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
APOEP02649 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
APOEP02649 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOEP02649 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
APOEP02649 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.32□□□□□ -1.72
APOEP02649 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOEP02649 MFSD8-220ENST00000641243 1422 ntBASIC4.32□□□□□ -1.72
APOEP02649 AL121657.1-201ENST00000327215 531 ntBASIC4.32□□□□□ -1.72
APOEP02649 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOEP02649 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.32□□□□□ -1.72
APOEP02649 RN7SKP33-201ENST00000410942 340 ntBASIC4.32□□□□□ -1.72
APOEP02649 TRIM60P17-201ENST00000415181 719 ntBASIC4.32□□□□□ -1.72
APOEP02649 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.32□□□□□ -1.72
APOEP02649 RCC2P2-201ENST00000422174 918 ntBASIC4.32□□□□□ -1.72
APOEP02649 MRPL50P1-201ENST00000431951 384 ntBASIC4.32□□□□□ -1.72
APOEP02649 RAD23BP3-201ENST00000454157 1152 ntBASIC4.32□□□□□ -1.72
APOEP02649 RPL36AP13-201ENST00000457490 317 ntBASIC4.32□□□□□ -1.72
APOEP02649 RPL7AP52-201ENST00000458096 790 ntBASIC4.32□□□□□ -1.72
APOEP02649 AC006517.1-201ENST00000480485 328 ntBASIC4.32□□□□□ -1.72
APOEP02649 AC093267.1-201ENST00000489176 961 ntBASIC4.32□□□□□ -1.72
APOEP02649 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.32□□□□□ -1.72
APOEP02649 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.32□□□□□ -1.72
APOEP02649 MTCO1P35-201ENST00000515270 228 ntBASIC4.32□□□□□ -1.72
APOEP02649 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.32□□□□□ -1.72
APOEP02649 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.32□□□□□ -1.72
APOEP02649 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.32□□□□□ -1.72
APOEP02649 AC007424.1-203ENST00000554613 687 ntBASIC4.32□□□□□ -1.72
APOEP02649 AC025884.1-201ENST00000556034 378 ntBASIC4.32□□□□□ -1.72
APOEP02649 AC064801.1-201ENST00000612025 407 ntBASIC4.32□□□□□ -1.72
APOEP02649 AC015922.4-201ENST00000612568 690 ntBASIC4.32□□□□□ -1.72
APOEP02649 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOEP02649 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOEP02649 AC010608.2-201ENST00000624830 470 ntBASIC4.32□□□□□ -1.72
APOEP02649 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.32□□□□□ -1.72
APOEP02649 AC107021.2-201ENST00000567714 2095 ntBASIC4.32□□□□□ -1.72
APOEP02649 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
APOEP02649 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
APOEP02649 AC116667.1-201ENST00000604855 2072 ntBASIC4.31□□□□□ -1.72
APOEP02649 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
APOEP02649 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
APOEP02649 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
APOEP02649 RN7SKP44-201ENST00000363602 316 ntBASIC4.31□□□□□ -1.72
APOEP02649 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
APOEP02649 MTND4LP21-201ENST00000415303 295 ntBASIC4.31□□□□□ -1.72
APOEP02649 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.31□□□□□ -1.72
APOEP02649 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.31□□□□□ -1.72
APOEP02649 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 AL133244.1-201ENST00000456007 258 ntBASIC4.31□□□□□ -1.72
APOEP02649 SEPT14P1-201ENST00000458703 648 ntBASIC4.31□□□□□ -1.72
APOEP02649 RPS7P7-201ENST00000463499 571 ntBASIC4.31□□□□□ -1.72
APOEP02649 AC025554.1-201ENST00000505641 188 ntBASIC4.31□□□□□ -1.72
APOEP02649 MIR2116-201ENST00000517221 80 ntBASIC4.31□□□□□ -1.72
APOEP02649 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
APOEP02649 IGHV3-32-201ENST00000519182 355 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms