Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC087763.1-201ENST00000603391 286 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 OR2AS2P-201ENST00000606902 342 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC100827.5-201ENST00000615883 426 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC121761.2-201ENST00000617300 689 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 MIR6839-201ENST00000620425 113 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC073530.2-201ENST00000623987 261 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 HSPA8P14-201ENST00000552265 1805 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4BO75351 AL603750.1-201ENST00000624216 1717 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4BO75351 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4BO75351 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.21□□□□□ -1.57
VPS4BO75351 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VPS4BO75351 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
VPS4BO75351 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.21□□□□□ -1.57
VPS4BO75351 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS4BO75351 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.57
VPS4BO75351 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS4BO75351 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 RNU6-623P-201ENST00000363143 105 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS4BO75351 MIR1303-201ENST00000408625 86 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 RN7SKP273-201ENST00000411392 314 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 NRBF2P2-201ENST00000413087 861 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC114814.2-201ENST00000419195 485 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 GTF2IP23-201ENST00000423746 351 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 FAM96AP1-201ENST00000430879 482 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC098826.1-201ENST00000433943 471 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 CYCSP6-201ENST00000434498 302 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AL354941.1-201ENST00000438600 464 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 MTCYBP34-201ENST00000439552 670 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS4BO75351 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS4BO75351 AL672138.1-201ENST00000450604 1015 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 VDAC2P4-201ENST00000452925 711 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS4BO75351 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS4BO75351 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 GAPDHP36-201ENST00000480688 918 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 RNU6-759P-201ENST00000516740 103 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 RN7SKP99-201ENST00000517028 307 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC100784.1-201ENST00000522790 310 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 OR5AZ1P-201ENST00000527448 943 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC005832.3-201ENST00000537929 631 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC116553.2-201ENST00000564203 463 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC022884.3-201ENST00000579571 248 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AP000769.2-201ENST00000602344 396 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 DUXAP11-201ENST00000603858 526 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC010738.1-201ENST00000604970 987 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AL592221.1-201ENST00000605266 382 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AC009163.6-201ENST00000612367 342 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC074140.1-201ENST00000621617 208 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 AL359757.1-201ENST00000623176 255 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS4BO75351 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS4BO75351 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 AL355852.1-201ENST00000454081 1771 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.58
VPS4BO75351 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS4BO75351 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS4BO75351 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VPS4BO75351 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS4BO75351 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms