Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PIGPP4-201ENST00000584447 307 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 MIR4999-201ENST00000585029 91 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 AC008521.2-201ENST00000591021 259 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 RNA5SP440-201ENST00000612665 119 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 MIR8080-201ENST00000622224 89 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 AC079248.2-201ENST00000623779 326 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.18□□□□□ -1.58
PHGDHO43175 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 AC107982.1-201ENST00000507171 1300 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.17□□□□□ -1.58
PHGDHO43175 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC011447.7-201ENST00000624228 1590 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
PHGDHO43175 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 RN7SKP124-201ENST00000364730 341 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHGDHO43175 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHGDHO43175 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHGDHO43175 RN7SKP286-201ENST00000410894 299 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 FCF1P2-201ENST00000415284 583 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.17□□□□□ -1.58
PHGDHO43175 AL031736.2-201ENST00000426573 787 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.17□□□□□ -1.58
PHGDHO43175 AC010881.1-201ENST00000433830 235 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.17□□□□□ -1.58
PHGDHO43175 AL445567.1-201ENST00000439121 144 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 GTF3AP5-201ENST00000442645 697 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AL161636.2-201ENST00000445179 927 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.17□□□□□ -1.58
PHGDHO43175 BZW1P2-201ENST00000473537 826 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 RPS3AP43-201ENST00000479743 781 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.17□□□□□ -1.58
PHGDHO43175 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.17□□□□□ -1.58
PHGDHO43175 MTCO3P28-201ENST00000513351 515 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC006427.1-201ENST00000514359 712 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 MTCO1P30-201ENST00000515244 580 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 RNU6-941P-201ENST00000516346 108 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 RNU6-232P-201ENST00000517144 64 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.17□□□□□ -1.58
PHGDHO43175 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.17□□□□□ -1.58
PHGDHO43175 AC006349.1-201ENST00000555526 235 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.17□□□□□ -1.58
PHGDHO43175 MIR3936-201ENST00000584304 110 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC103881.1-201ENST00000603476 538 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC104695.2-201ENST00000605056 775 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC097505.1-201ENST00000610199 565 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC100847.1-201ENST00000611316 481 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 AL392048.1-201ENST00000613946 534 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.17□□□□□ -1.58
PHGDHO43175 AC127024.6-201ENST00000621598 424 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 AC025574.1-201ENST00000554784 1653 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.17□□□□□ -1.58
PHGDHO43175 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 AC053481.2-202ENST00000582394 1500 ntBASIC5.17□□□□□ -1.58
PHGDHO43175 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHGDHO43175 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHGDHO43175 PCAT14-202ENST00000627127 3935 ntBASIC5.16□□□□□ -1.58
PHGDHO43175 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHGDHO43175 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PHGDHO43175 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.16□□□□□ -1.58
PHGDHO43175 AL118496.1-201ENST00000440201 1812 ntBASIC5.16□□□□□ -1.58
PHGDHO43175 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHGDHO43175 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHGDHO43175 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
PHGDHO43175 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PHGDHO43175 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHGDHO43175 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHGDHO43175 RNU6-621P-201ENST00000364752 109 ntBASIC5.16□□□□□ -1.58
PHGDHO43175 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHGDHO43175 LUZP4P1-201ENST00000415420 344 ntBASIC5.16□□□□□ -1.58
PHGDHO43175 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.16□□□□□ -1.58
PHGDHO43175 MTCO3P1-205ENST00000422088 832 ntBASIC5.16□□□□□ -1.58
PHGDHO43175 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.16□□□□□ -1.58
PHGDHO43175 RPL31P54-201ENST00000429803 370 ntBASIC5.16□□□□□ -1.58
PHGDHO43175 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms