Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC090953.1-201ENST00000604305 1092 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC012557.1-201ENST00000607115 611 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC074276.2-201ENST00000619891 348 ntBASIC4.66□□□□□ -1.66
CLDN3O15551 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN3O15551 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN3O15551 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLDN3O15551 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN3O15551 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN3O15551 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN3O15551 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.65□□□□□ -1.66
CLDN3O15551 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLDN3O15551 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.66
CLDN3O15551 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN3O15551 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
CLDN3O15551 RNU6-146P-201ENST00000384602 108 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AL161909.1-201ENST00000397390 712 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.65□□□□□ -1.67
CLDN3O15551 AL358176.3-201ENST00000420757 454 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN3O15551 AL445528.1-201ENST00000426330 420 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AC073335.1-201ENST00000427776 363 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN3O15551 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN3O15551 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.65□□□□□ -1.67
CLDN3O15551 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN3O15551 PGBD4P4-201ENST00000509673 613 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 SNORA31.9-201ENST00000516429 84 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AC134698.5-201ENST00000519444 336 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 SMARCE1P4-201ENST00000523647 241 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 MTND6P33-201ENST00000571794 183 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN3O15551 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN3O15551 AC016957.2-201ENST00000616998 848 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AL669942.2-201ENST00000620352 697 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AL023881.1-201ENST00000621088 301 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 AC008013.2-202ENST00000637965 364 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 OR52H1-202ENST00000641796 1061 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN3O15551 AC114546.3-201ENST00000623582 1734 ntBASIC4.65□□□□□ -1.67
CLDN3O15551 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN3O15551 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.65□□□□□ -1.67
CLDN3O15551 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CLDN3O15551 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLDN3O15551 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN3O15551 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN3O15551 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN3O15551 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN3O15551 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN3O15551 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN3O15551 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN3O15551 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN3O15551 RNU1-94P-201ENST00000362627 173 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 TRGV6-201ENST00000417928 299 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 AL161631.1-201ENST00000417933 486 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 AC091390.1-201ENST00000433904 331 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 MRPS33P4-201ENST00000434892 317 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN3O15551 GEMIN8P3-201ENST00000445417 720 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 RPS26P28-201ENST00000470806 348 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 AC104164.2-201ENST00000496953 495 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 HMGB1P3-201ENST00000502802 616 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.64□□□□□ -1.67
CLDN3O15551 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN3O15551 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN3O15551 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN3O15551 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 AL121834.1-201ENST00000572284 509 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 AC136624.4-201ENST00000573044 370 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 MIR4697-201ENST00000582977 78 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN3O15551 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.64□□□□□ -1.67
CLDN3O15551 AL161729.3-201ENST00000603533 673 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 LINC00901.1-201ENST00000617252 152 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 MIR8059-201ENST00000620427 81 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLDN3O15551 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN3O15551 AC009951.1-201ENST00000623674 2614 ntBASIC4.64□□□□□ -1.67
CLDN3O15551 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CLDN3O15551 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLDN3O15551 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN3O15551 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CLDN3O15551 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN3O15551 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLDN3O15551 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN3O15551 RNU1-15P-201ENST00000353977 144 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 RNU1-108P-201ENST00000362556 161 ntBASIC4.63□□□□□ -1.67
CLDN3O15551 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms