Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM38O00635 AC017079.1-201ENST00000333650 415 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 RN7SKP104-201ENST00000362605 328 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 RNA5SP123-201ENST00000363244 119 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM38O00635 SNORA51.8-201ENST00000384234 132 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 SNORD116-12-201ENST00000384468 92 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 OR8V1P-201ENST00000395193 873 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL049545.1-201ENST00000401856 572 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL136310.1-201ENST00000404926 654 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM38O00635 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM38O00635 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM38O00635 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM38O00635 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 RPS6P15-201ENST00000431996 751 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL049745.1-201ENST00000433953 286 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC090018.1-201ENST00000434369 367 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL353597.2-202ENST00000434901 373 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 MTND4P25-201ENST00000441039 533 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 TXNP5-201ENST00000441043 315 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM38O00635 CYCSP24-201ENST00000445119 316 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM38O00635 AL589880.1-201ENST00000448271 287 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM38O00635 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 NAP1L1P3-201ENST00000462291 880 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC092754.1-201ENST00000472975 479 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 RN7SL860P-201ENST00000473738 223 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM38O00635 GAPDHP39-201ENST00000481866 979 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM38O00635 RPS24P16-201ENST00000497294 392 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AF213884.2-201ENST00000510417 903 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM38O00635 RNU6-513P-201ENST00000516104 104 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM38O00635 BRD9P1-201ENST00000529855 560 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 MIR3934-201ENST00000579806 107 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM38O00635 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 CCDC58P3-201ENST00000590792 430 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 AC124856.1-201ENST00000600819 896 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC011453.2-201ENST00000603737 729 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL583856.2-201ENST00000606298 543 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AP000238.1-201ENST00000608759 426 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL122125.1-201ENST00000616999 600 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC234782.5-201ENST00000617723 324 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC078883.4-201ENST00000623218 367 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC091953.3-201ENST00000623220 236 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC135068.5-201ENST00000624197 983 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AL353662.3-201ENST00000625131 237 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TRIM38O00635 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 AC090897.3-201ENST00000636973 1157 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 AC006927.3-201ENST00000638789 384 ntBASIC5.2□□□□□ -1.58
TRIM38O00635 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM38O00635 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 AC100778.3-201ENST00000580060 1750 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 AP000526.1-201ENST00000603308 1388 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 AL451142.2-201ENST00000429076 2090 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TRIM38O00635 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM38O00635 RNU4-68P-201ENST00000364314 141 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 SNORD116-1-201ENST00000384335 95 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 SNORD116-8-201ENST00000384365 95 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 RNU6-178P-201ENST00000384631 104 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 MIR105-1-201ENST00000385222 81 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM38O00635 AC136624.1-201ENST00000400791 413 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 RNU6-648P-201ENST00000410190 107 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 RNU4-22P-201ENST00000411058 166 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 RPS26P47-201ENST00000427219 348 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AL589823.1-201ENST00000429577 183 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM38O00635 RHEBP2-201ENST00000450289 600 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 NPM1P13-201ENST00000452663 865 ntBASIC5.19□□□□□ -1.58
TRIM38O00635 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM38O00635 PTGES3P5-201ENST00000455109 434 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms