Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 KLKP1-201ENST00000595979 403 ntBASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 AC069307.1-201ENST00000602820 447 ntBASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 AL133393.1-201ENST00000603277 287 ntBASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 AC090425.2-201ENST00000608818 501 ntBASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 AC019193.2-201ENST00000610012 634 ntBASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 ATE1-AS1-202ENST00000636460 506 ntBASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LINC01558Q9Y6Z2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
LINC01558Q9Y6Z2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
LINC01558Q9Y6Z2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.03□□□□□ -2.09
LINC01558Q9Y6Z2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC108467.2-201ENST00000617640 1597 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RNA5SP366-201ENST00000365454 123 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RNA5SP87-201ENST00000384155 118 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RPL23AP47-201ENST00000408017 460 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RN7SKP58-201ENST00000411010 305 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 BMS1P22-201ENST00000414726 313 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC006509.1-201ENST00000420788 634 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 CHIAP3-201ENST00000423668 1133 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RPS12P10-201ENST00000427031 377 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL590103.1-201ENST00000434488 307 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 YWHAZP7-201ENST00000436906 631 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC105402.2-201ENST00000438503 358 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 ARMC4P1-201ENST00000438905 707 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL512637.1-201ENST00000439523 1231 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AMYP1-201ENST00000440059 1023 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 GAPDHP27-201ENST00000447427 1020 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RPS5P7-201ENST00000456664 608 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 HMGN1P18-201ENST00000457642 277 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RPS27AP1-201ENST00000475545 471 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC007688.1-201ENST00000475592 759 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 TRBV8-1-201ENST00000481590 279 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC015864.1-201ENST00000496512 544 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL845552.1-201ENST00000556820 323 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC004232.2-201ENST00000574245 821 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC012417.1-201ENST00000582307 1039 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC011891.2-201ENST00000604949 397 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC018754.1-201ENST00000607486 925 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 MIR7847-201ENST00000610912 103 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC090527.3-201ENST00000619041 548 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL590240.3-201ENST00000621416 943 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AC006065.5-201ENST00000623427 349 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AP002799.1-201ENST00000623552 423 ntBASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01558Q9Y6Z2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 CIR1P2-201ENST00000514821 1342 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 RNA5SP429-201ENST00000363688 109 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 U3.11-201ENST00000364476 212 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 U8.9-201ENST00000365667 134 ntBASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01558Q9Y6Z2 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms