Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 RNU6-819P-201ENST00000364116 107 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AL607077.1-201ENST00000401718 499 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 RN7SKP235-201ENST00000410662 305 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 RPL23AP4-201ENST00000427757 463 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC073335.1-201ENST00000427776 363 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AL132765.1-201ENST00000434165 553 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 RPS20P1-201ENST00000434853 354 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 HLA-N-201ENST00000437516 135 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AL354710.1-201ENST00000453641 246 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC010374.1-201ENST00000503762 1237 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 MTCO1P35-201ENST00000515270 228 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 SNORA70.17-201ENST00000516449 133 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC068446.3-201ENST00000555285 382 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC007224.1-201ENST00000564410 144 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC010857.1-201ENST00000606398 594 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 RMST_5.1-201ENST00000618704 126 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AL445363.3-201ENST00000623080 671 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 AC087190.4-201ENST00000574616 8334 ntBASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 LARP1BP1-201ENST00000506036 1359 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 RNU6-1251P-201ENST00000364502 107 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 RHOT1P2-201ENST00000366423 333 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 MIR93-201ENST00000385024 80 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC093719.1-202ENST00000392735 373 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 RPS26P8-201ENST00000393490 348 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AL078604.1-201ENST00000404609 466 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AL035696.2-201ENST00000407941 709 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 RNU6-564P-201ENST00000410983 104 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 SNORA74C-2-201ENST00000411179 201 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 UBTFL3-201ENST00000418934 1024 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC244453.4-201ENST00000419150 388 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 UBTFL6-201ENST00000477929 1024 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 LARP7P4-201ENST00000481075 878 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 PPM1AP1-201ENST00000502740 1135 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 RNA5SP519-201ENST00000516480 119 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC008638.3-201ENST00000603341 463 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC090948.2-201ENST00000607363 564 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC018529.3-201ENST00000624212 2254 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AL356489.2-201ENST00000566968 3528 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC105074.1-201ENST00000623380 3095 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 AC016588.2-201ENST00000632484 3021 ntBASIC5.05□□□□□ -1.6
CLIP2Q9UDT6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AL451142.2-201ENST00000429076 2090 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AC011155.1-201ENST00000316512 456 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 RNU1-15P-201ENST00000353977 144 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 RNU1-14P-201ENST00000362759 152 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 RNU6-618P-201ENST00000363518 112 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 RNA5SP515-201ENST00000364570 118 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 MIR513A2-201ENST00000385249 127 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AL158073.1-201ENST00000426848 1104 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 XKRYP6-201ENST00000440468 1116 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 XKRYP3-201ENST00000442113 1116 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms