Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 AL132765.1-201ENST00000434165 553 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 MTND4P15-201ENST00000437913 1033 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC092013.1-201ENST00000438795 332 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 ARL4AP3-201ENST00000441452 574 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 ABCF2P2-201ENST00000450549 296 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC009963.2-201ENST00000453431 138 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 MTND2P6-201ENST00000455337 1030 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC005229.2-201ENST00000456995 399 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 RPL23AP12-201ENST00000467573 473 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC007688.1-201ENST00000475592 759 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC091167.1-201ENST00000492017 396 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC005912.1-201ENST00000495392 255 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC104164.2-201ENST00000496953 495 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AL592156.1-201ENST00000508758 304 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 RFPL4AP5-201ENST00000514977 504 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 RN7SKP141-201ENST00000516167 338 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 IGKV2D-10-201ENST00000520194 281 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 OR8K2P-201ENST00000524645 927 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 CYCSP29-201ENST00000533731 318 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC006064.5-201ENST00000541782 248 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 DPRXP4-201ENST00000578053 568 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AL161729.3-201ENST00000603533 673 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 ARF4P1-201ENST00000605447 541 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AL162574.2-201ENST00000614618 657 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AL445567.2-201ENST00000618935 498 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC090617.9-201ENST00000623751 147 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 MIR6830-201ENST00000636015 70 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 TMEM30CP-203ENST00000637814 1035 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 ZNF90P1-201ENST00000480493 1951 ntBASIC4.34□□□□□ -1.71
LHX3Q9UBR4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LHX3Q9UBR4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
LHX3Q9UBR4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LHX3Q9UBR4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LHX3Q9UBR4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
LHX3Q9UBR4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LHX3Q9UBR4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AL450326.2-201ENST00000421913 1962 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 RN7SKP97-201ENST00000410966 333 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 EIF1P3-201ENST00000423841 334 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 NPM1P33-201ENST00000438918 872 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 TPT1P12-201ENST00000448968 492 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 RPL23AP81-201ENST00000455252 467 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC010618.1-201ENST00000469924 477 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 UQCRHP4-201ENST00000471686 272 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 RN7SL41P-201ENST00000476144 297 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 PGBD4P4-201ENST00000509673 613 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 RNA5SP73-201ENST00000516744 108 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC100770.1-201ENST00000532310 322 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC093014.1-201ENST00000548926 724 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AL109741.3-201ENST00000561748 592 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC011477.5-201ENST00000586571 259 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC026979.4-201ENST00000606555 645 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 FAM27D1-201ENST00000612308 341 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 MIR1264-201ENST00000616374 69 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC019278.1-201ENST00000623516 479 ntBASIC4.33□□□□□ -1.72
LHX3Q9UBR4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.33□□□□□ -1.72
LHX3Q9UBR4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms