Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC090312.1-201ENST00000580637 348 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC105129.3-201ENST00000605455 485 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AP003392.5-201ENST00000607857 415 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC013562.2-201ENST00000611632 603 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LINC00901.1-201ENST00000617252 152 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC009704.2-201ENST00000618739 483 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AL731566.1-201ENST00000620490 1937 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 LINC01355-201ENST00000566551 5444 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RNU4-24P-201ENST00000364565 139 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RNA5SP90-201ENST00000364801 99 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 Y_RNA.505-201ENST00000384489 102 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 MIR600-201ENST00000385007 98 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RN7SKP126-201ENST00000411143 300 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 OR4K6P-201ENST00000416478 897 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RBMY2KP-201ENST00000418221 992 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 EI24P4-201ENST00000423683 1078 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RPS29P10-201ENST00000439197 166 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC002542.1-201ENST00000440683 193 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 FGF7P5-201ENST00000441829 291 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC090804.1-201ENST00000448870 490 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AL354710.1-201ENST00000453641 246 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RPS18P6-201ENST00000476880 458 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 BX284632.1-201ENST00000478218 541 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RPL7P41-201ENST00000485823 957 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC109462.1-201ENST00000491087 368 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 UBA52P3-201ENST00000491303 382 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC091860.1-201ENST00000505723 432 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 NDUFB4P12-201ENST00000513465 390 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 PRELID3BP4-201ENST00000515476 571 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RNA5SP360-201ENST00000516555 118 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 IGHV3-63-201ENST00000518422 341 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 C1GALT1P3-201ENST00000522049 819 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 NBEAP1-201ENST00000554452 979 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC006116.3-201ENST00000592968 361 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AL583856.2-201ENST00000606298 543 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC009163.6-201ENST00000612367 342 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC026585.1-201ENST00000619582 524 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC092608.3-201ENST00000625017 386 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 LINC01739-205ENST00000641890 573 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AL022393.1-201ENST00000625142 1677 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 ELL2P3-201ENST00000457883 1602 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 ABCC13-202ENST00000463099 3842 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
DKK3Q9UBP4 MAPK10-349ENST00000641767 3661 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 AC073136.1-201ENST00000449426 2884 ntBASIC5.26□□□□□ -1.57
DKK3Q9UBP4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC008079.2-201ENST00000623543 20396 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms