Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 CEACAMP1-201ENST00000434624 1035 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 FHP1-201ENST00000442741 703 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AL512326.1-201ENST00000443050 721 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC096741.1-201ENST00000472250 846 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 SETP6-201ENST00000479329 568 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC007686.1-201ENST00000488511 463 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 RN7SL810P-201ENST00000493031 276 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC112518.2-201ENST00000508565 425 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC090515.3-201ENST00000560431 315 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AL159169.2-201ENST00000610061 1269 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC008759.3-201ENST00000613300 508 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC008147.4-201ENST00000617570 1204 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC007275.1-201ENST00000621243 671 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 MIR6730-201ENST00000622213 67 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC021242.1-201ENST00000507315 2035 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 SCN1A-220ENST00000641603 12506 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 RNU1-14P-201ENST00000362759 152 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 RNU6-31P-201ENST00000384388 108 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 RPL26P37-201ENST00000411983 438 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC013262.1-201ENST00000426710 252 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 RPS29P17-201ENST00000430795 166 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 SNRPFP2-201ENST00000440710 251 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AL353898.1-201ENST00000444055 238 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 RPL23AP24-201ENST00000458203 385 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC013356.1-201ENST00000489027 564 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 GTF2IP9-201ENST00000502460 301 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 RNA5SP49-201ENST00000516450 115 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 RNA5SP519-201ENST00000516480 119 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AP001372.4-201ENST00000524889 472 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AL121594.4-201ENST00000556211 1196 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 YWHAZP1-201ENST00000556286 722 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC007599.1-201ENST00000568688 1174 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 CBX3P2-202ENST00000583365 535 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC018754.1-201ENST00000607486 925 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AP005229.2-201ENST00000609980 697 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AP003497.2-201ENST00000624220 967 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC139713.2-214ENST00000642059 1811 ntBASIC4.56□□□□□ -1.68
SIX2Q9NPC8 AC011266.1-201ENST00000624119 3569 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 MFSD8-242ENST00000641690 4199 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AL672167.2-201ENST00000377164 879 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms