Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 MTCO1P40-201ENST00000574371 625 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC069304.3-201ENST00000603938 1084 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 Z94722.1-201ENST00000604328 474 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 FAM25E-202ENST00000608562 189 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC093799.2-201ENST00000610062 578 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC024257.5-201ENST00000612739 531 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 AC007342.8-201ENST00000623278 678 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 MTND5P31-201ENST00000419366 1374 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 GTF2H2B-203ENST00000508065 1432 ntBASIC5.13□□□□□ -1.59
USP29Q9HBJ7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USP29Q9HBJ7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC112198.2-201ENST00000426589 6996 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC093775.1-201ENST00000624154 1868 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 SNORD116.1-201ENST00000365628 92 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC105402.1-201ENST00000413336 545 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 Z75741.2-201ENST00000417272 1167 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC009518.2-201ENST00000418056 731 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 MTND2P18-201ENST00000419962 1030 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 OR2AH1P-201ENST00000425717 928 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 RPL34P20-201ENST00000442771 351 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 RPL31P44-201ENST00000447680 377 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AL591473.1-201ENST00000464297 313 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC096741.1-201ENST00000472250 846 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC093890.1-201ENST00000502554 540 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 ENPP7P9-201ENST00000514456 627 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC008083.2-201ENST00000546707 476 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 CYP2C60P-201ENST00000566088 139 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AP001269.3-201ENST00000588718 329 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC104687.2-201ENST00000604442 342 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AL392112.1-201ENST00000605115 829 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC006840.1-201ENST00000623069 542 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC024595.1-201ENST00000623088 387 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC004943.3-201ENST00000624116 600 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 U6.107-201ENST00000637108 79 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 SMG1P4-204ENST00000523028 4131 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 AC126323.6-202ENST00000568092 3511 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 MUC2-202ENST00000613187 4845 ntBASIC5.12□□□□□ -1.59
USP29Q9HBJ7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
USP29Q9HBJ7 MAPK10-263ENST00000641052 4307 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 SNORA40.2-201ENST00000390847 128 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 TMBIM7P-201ENST00000418074 855 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.11□□□□□ -1.59
USP29Q9HBJ7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP29Q9HBJ7 AC104837.2-201ENST00000427236 424 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms