Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AL590763.1-201ENST00000398297 1545 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 CASC19-206ENST00000641028 1430 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
BRF2Q9HAW0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
BRF2Q9HAW0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
BRF2Q9HAW0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL359922.3-201ENST00000624779 1670 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 RNU4-51P-201ENST00000364206 140 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL078599.1-201ENST00000402075 293 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 SNORA11.3-201ENST00000408471 128 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 OR51B3P-201ENST00000412287 913 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC027644.1-201ENST00000419595 298 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL138785.1-201ENST00000425821 331 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 C1DP1-201ENST00000426049 402 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC105402.2-201ENST00000438503 358 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 OR10R1P-201ENST00000441524 1141 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL137845.2-201ENST00000444292 988 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AURKAPS1-201ENST00000451805 1212 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 OFD1P3Y-201ENST00000453312 783 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 RPS18P6-201ENST00000476880 458 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC090686.1-201ENST00000481577 749 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC005351.1-201ENST00000511152 786 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC044913.1-201ENST00000557200 430 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AGGF1P5-201ENST00000567900 919 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 MIR4691-201ENST00000583764 85 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AP001160.4-201ENST00000596971 382 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AL445435.1-201ENST00000604232 665 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC131238.1-201ENST00000617135 328 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 SNORA11.6-201ENST00000619030 128 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 LINC01739-205ENST00000641890 573 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 AC099786.3-201ENST00000565735 1410 ntBASIC4.71□□□□□ -1.66
BRF2Q9HAW0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.71□□□□□ -1.66
BRF2Q9HAW0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC008758.3-201ENST00000507003 1829 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RNA5SP428-201ENST00000365129 132 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RNU6-619P-201ENST00000365146 108 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms