Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 MIR5096-201ENST00000583713 70 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AL109653.1-201ENST00000603091 248 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 Z99497.2-201ENST00000603634 310 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AP002802.2-201ENST00000605877 235 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC019193.2-201ENST00000610012 634 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 RMST_5.1-201ENST00000618704 126 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC017037.3-201ENST00000625016 472 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 SALL4P2-201ENST00000423288 2910 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC011503.2-201ENST00000594230 1500 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 RPL5P19-201ENST00000404228 893 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 U3.32-201ENST00000408116 212 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 LIPT1P1-201ENST00000415870 1186 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 CENPIP1-201ENST00000425713 902 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 SNRPFP2-201ENST00000440710 251 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 VN1R25P-201ENST00000443385 738 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC000111.2-201ENST00000448200 210 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 CEACAMP6-201ENST00000452007 574 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 RPL21P18-201ENST00000469899 480 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 SUMO1P1-201ENST00000497904 306 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC105031.1-201ENST00000518550 476 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 OR5M2P-201ENST00000529003 936 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC104229.1-201ENST00000561364 255 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC009094.1-201ENST00000564443 426 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 RN7SL690P-201ENST00000582087 240 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC018638.7-201ENST00000605836 1114 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AL392048.1-201ENST00000613946 534 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC083809.1-201ENST00000615051 472 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AL022401.1-201ENST00000619498 108 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC004232.3-201ENST00000622977 525 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AL132640.2-201ENST00000559968 1698 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AP001273.1-201ENST00000624493 3152 ntBASIC5.01□□□□□ -1.61
EBF3Q9H4W6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.01□□□□□ -1.61
EBF3Q9H4W6 AC008432.1-201ENST00000615912 1320 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AL356317.1-201ENST00000396110 1436 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AC021755.1-201ENST00000559747 1447 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5□□□□□ -1.61
EBF3Q9H4W6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 RNA5-8SP7-201ENST00000363443 155 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 RPS24P7-201ENST00000416921 246 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AL034379.1-201ENST00000423216 253 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AL160175.1-201ENST00000428124 247 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 CNOT7P1-201ENST00000429006 852 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 MED6P1-201ENST00000439659 713 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 MTCO2P7-201ENST00000446518 666 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms